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CAZyme Information: MGYG000003337_01571
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Ruminococcus_C sp900765125 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminococcus_C; Ruminococcus_C sp900765125 | |||||||||||
| CAZyme ID | MGYG000003337_01571 | |||||||||||
| CAZy Family | GH59 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 2388; End: 5528 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH59 | 29 | 692 | 5.9e-171 | 0.9873217115689382 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam02057 | Glyco_hydro_59 | 2.14e-126 | 32 | 352 | 1 | 290 | Glycosyl hydrolase family 59. |
| PRK10811 | rne | 4.27e-05 | 816 | 1041 | 850 | 1044 | ribonuclease E; Reviewed |
| COG5638 | COG5638 | 2.22e-04 | 859 | 946 | 58 | 144 | Uncharacterized conserved protein [Function unknown]. |
| PHA00435 | PHA00435 | 0.001 | 828 | 995 | 14 | 153 | capsid assembly protein |
| NF033930 | pneumo_PspA | 0.003 | 835 | 998 | 69 | 224 | pneumococcal surface protein A. The pneumococcal surface protein proteins, found in Streptococcus pneumoniae, are repetitive, with patterns of localized high sequence identity across pairs of proteins given different specific names that recombination may be presumed. This protein, PspA, has an N-terminal region that lacks a cross-wall-targeting YSIRK type extended signal peptide, in contrast to the closely related choline-binding protein CbpA which has a similar C-terminus but a YSIRK-containing region at the N-terminus. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| BCN31742.1 | 1.40e-195 | 15 | 819 | 6 | 823 |
| CCO04392.1 | 8.02e-194 | 16 | 815 | 43 | 838 |
| CBK96504.1 | 3.55e-190 | 3 | 815 | 9 | 804 |
| CBL34686.1 | 4.54e-189 | 3 | 815 | 9 | 804 |
| CBL16905.1 | 6.28e-177 | 33 | 815 | 4 | 780 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4CCC_A | 1.43e-36 | 32 | 662 | 25 | 619 | StructureOf Mouse Galactocerebrosidase With 4nbdg: Enzyme-substrate Complex [Mus musculus],4CCD_A Structure Of Mouse Galactocerebrosidase With D-galactal: Enzyme-intermediate Complex [Mus musculus],4CCE_A Structure Of Mouse Galactocerebrosidase With Galactose: Enzyme-product Complex [Mus musculus],4UFH_A Mouse Galactocerebrosidase complexed with iso-galacto-fagomine IGF [Mus musculus],4UFI_A Mouse Galactocerebrosidase complexed with aza-galacto-fagomine AGF [Mus musculus],4UFJ_A Mouse Galactocerebrosidase complexed with iso-galacto-fagomine lactam IGL [Mus musculus],4UFK_A Mouse Galactocerebrosidase complexed with dideoxy-imino-lyxitol DIL [Mus musculus],4UFL_A Mouse Galactocerebrosidase complexed with deoxy-galacto-noeurostegine DGN [Mus musculus],4UFM_A Mouse Galactocerebrosidase complexed with 1-deoxy-galacto-nojirimycin DGJ [Mus musculus],5NXB_A Mouse galactocerebrosidase in complex with saposin A [Mus musculus],5NXB_B Mouse galactocerebrosidase in complex with saposin A [Mus musculus],6Y6S_A Chain A, Galactocerebrosidase [Mus musculus],6Y6T_A Chain A, Galactocerebrosidase [Mus musculus] |
| 3ZR5_A | 1.46e-36 | 32 | 662 | 27 | 621 | STRUCTUREOF GALACTOCEREBROSIDASE FROM MOUSE [Mus musculus],3ZR6_A STRUCTURE OF GALACTOCEREBROSIDASE FROM MOUSE IN COMPLEX WITH GALACTOSE [Mus musculus] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P54818 | 1.00e-35 | 32 | 662 | 55 | 649 | Galactocerebrosidase OS=Mus musculus OX=10090 GN=Galc PE=1 SV=2 |
| Q5SNX7 | 1.96e-35 | 32 | 661 | 33 | 621 | Galactocerebrosidase OS=Danio rerio OX=7955 GN=galc PE=2 SV=1 |
| P54804 | 3.74e-35 | 32 | 692 | 39 | 665 | Galactocerebrosidase OS=Canis lupus familiaris OX=9615 GN=GALC PE=1 SV=1 |
| Q0VA39 | 9.46e-35 | 32 | 660 | 47 | 639 | Galactocerebrosidase OS=Xenopus tropicalis OX=8364 GN=galc PE=2 SV=1 |
| O02791 | 1.76e-34 | 32 | 692 | 55 | 681 | Galactocerebrosidase OS=Macaca mulatta OX=9544 GN=GALC PE=1 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000062 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |