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CAZyme Information: MGYG000003346_02108

You are here: Home > Sequence: MGYG000003346_02108

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp900554545
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900554545
CAZyme ID MGYG000003346_02108
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
520 MGYG000003346_66|CGC1 56534.53 4.9657
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003346 3265104 MAG China Asia
Gene Location Start: 4199;  End: 5761  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003346_02108.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 131 341 1.2e-42 0.8465346534653465

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 3.19e-45 22 427 11 344
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 4.28e-39 134 342 12 190
Amb_all domain.
pfam00544 Pec_lyase_C 8.46e-26 134 338 30 211
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT75310.1 7.63e-114 26 462 11 423
QNH62939.1 2.25e-34 62 427 76 378
SCA88301.1 2.03e-32 31 427 25 334
QAT67521.1 2.03e-32 31 427 25 334
ATH93726.1 1.49e-31 31 427 29 338

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5AMV_A 6.46e-23 165 427 148 398
Structuralinsights into the loss of catalytic competence in pectate lyase at low pH [Bacillus subtilis],5X2I_A Polygalacturonate Lyase by Fusing with a Self-assembling Amphipathic Peptide [Bacillus subtilis subsp. subtilis str. 168]
1BN8_A 8.03e-23 165 427 169 419
BacillusSubtilis Pectate Lyase [Bacillus subtilis]
3VMV_A 1.51e-22 61 427 10 325
Crystalstructure of pectate lyase Bsp165PelA from Bacillus sp. N165 [Bacillus sp. N16-5],3VMW_A Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 in complex with trigalacturonate [Bacillus sp. N16-5]
2BSP_A 1.96e-22 165 427 169 419
ChainA, PROTEIN (PECTATE LYASE) [Bacillus subtilis]
2NZM_A 3.88e-22 165 427 148 398
ChainA, Pectate lyase [Bacillus subtilis],2O04_A Chain A, Pectate lyase [Bacillus subtilis],2O0V_A Chain A, Pectate lyase [Bacillus subtilis],2O0W_A Chain A, Pectate lyase [Bacillus subtilis],2O17_A Chain A, Pectate lyase [Bacillus subtilis],2O1D_A Chain A, Pectate lyase [Bacillus subtilis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B1B6T1 1.71e-29 42 427 41 339
Pectate trisaccharide-lyase OS=Bacillus sp. OX=1409 GN=pel PE=1 SV=1
Q65DC2 1.71e-29 42 427 41 339
Pectate trisaccharide-lyase OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / CCUG 7422 / NBRC 12200 / NCIMB 9375 / NCTC 10341 / NRRL NRS-1264 / Gibson 46) OX=279010 GN=BLi04129 PE=3 SV=1
Q8GCB2 1.71e-29 42 427 41 339
Pectate trisaccharide-lyase OS=Bacillus licheniformis OX=1402 GN=pelA PE=1 SV=1
P39116 4.40e-22 165 427 169 419
Pectate lyase OS=Bacillus subtilis (strain 168) OX=224308 GN=pel PE=1 SV=1
B1L969 2.61e-21 21 427 7 356
Pectate trisaccharide-lyase OS=Thermotoga sp. (strain RQ2) OX=126740 GN=pelA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000244 0.999107 0.000182 0.000153 0.000147 0.000136

TMHMM  Annotations      download full data without filtering help

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