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CAZyme Information: MGYG000003351_00029

You are here: Home > Sequence: MGYG000003351_00029

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides sp900765785
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides sp900765785
CAZyme ID MGYG000003351_00029
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
775 MGYG000003351_10|CGC1 86137.47 4.9944
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003351 6569749 MAG China Asia
Gene Location Start: 14876;  End: 17203  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003351_00029.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 473 754 2.1e-39 0.7446153846153846

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 2.73e-19 474 692 202 398
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 1.77e-13 481 720 48 273
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN03010 PLN03010 2.37e-12 526 721 168 345
polygalacturonase
PLN02793 PLN02793 2.88e-11 484 721 143 365
Probable polygalacturonase
PLN02218 PLN02218 2.81e-09 562 753 241 410
polygalacturonase ADPG

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QRP58902.1 0.0 1 775 1 775
QQA09745.1 0.0 1 775 1 775
QQT79214.1 0.0 1 775 1 775
ASW16403.1 0.0 1 775 1 775
BBL02017.1 1.65e-171 53 766 31 735

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8RY29 5.33e-08 528 766 205 423
Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2
B0YAA4 2.26e-07 506 739 175 354
Probable exopolygalacturonase B OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pgxB PE=3 SV=2
Q4WBK6 2.26e-07 506 739 175 354
Probable exopolygalacturonase B OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pgxB PE=3 SV=2
A1DAX2 5.21e-07 506 765 175 389
Probable exopolygalacturonase B OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgxB PE=3 SV=1
A7PZL3 1.28e-06 479 649 169 336
Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000428 0.029983 0.969502 0.000025 0.000046 0.000022

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003351_00029.