Species | Lachnoclostridium phytofermentans_A | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lachnoclostridium; Lachnoclostridium phytofermentans_A | |||||||||||
CAZyme ID | MGYG000003355_00059 | |||||||||||
CAZy Family | GH28 | |||||||||||
CAZyme Description | hypothetical protein | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 15378; End: 16721 Strand: - |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GH28 | 32 | 383 | 1.2e-64 | 0.9323076923076923 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
COG5434 | Pgu1 | 4.27e-60 | 5 | 312 | 82 | 410 | Polygalacturonase [Carbohydrate transport and metabolism]. |
pfam00295 | Glyco_hydro_28 | 3.66e-16 | 104 | 375 | 51 | 304 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
PLN03003 | PLN03003 | 2.34e-10 | 7 | 222 | 25 | 217 | Probable polygalacturonase At3g15720 |
PLN02188 | PLN02188 | 8.81e-10 | 5 | 279 | 36 | 285 | polygalacturonase/glycoside hydrolase family protein |
pfam12708 | Pectate_lyase_3 | 2.12e-09 | 7 | 59 | 3 | 58 | Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
ABX43571.1 | 0.0 | 1 | 447 | 45 | 491 |
QRX63326.1 | 7.71e-77 | 4 | 438 | 33 | 443 |
AKQ47633.1 | 7.11e-73 | 2 | 420 | 36 | 431 |
ADY36938.1 | 7.52e-71 | 4 | 391 | 29 | 416 |
ALI97835.1 | 1.39e-70 | 5 | 410 | 46 | 427 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
5OLP_A | 5.87e-35 | 6 | 374 | 45 | 425 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
3JUR_A | 4.32e-29 | 2 | 371 | 25 | 407 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
4MXN_A | 3.06e-18 | 4 | 242 | 20 | 236 | Crystalstructure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_B Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_C Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_D Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184] |
2UVE_A | 8.45e-13 | 4 | 285 | 155 | 502 | Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica] |
3ZPP_A | 4.11e-09 | 7 | 185 | 25 | 194 | Structureof the Streptococcus pneumoniae surface protein and adhesin PfbA [Streptococcus pneumoniae TIGR4] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
A7PZL3 | 6.73e-26 | 7 | 303 | 64 | 364 | Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 |
P15922 | 2.09e-14 | 4 | 270 | 150 | 451 | Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1 |
P35339 | 1.65e-13 | 6 | 327 | 41 | 326 | Exopolygalacturonase OS=Zea mays OX=4577 GN=PG2C PE=2 SV=1 |
P35338 | 3.92e-13 | 6 | 295 | 41 | 311 | Exopolygalacturonase OS=Zea mays OX=4577 GN=PG9 PE=2 SV=1 |
P26216 | 3.92e-13 | 6 | 374 | 41 | 380 | Exopolygalacturonase OS=Zea mays OX=4577 GN=PG1 PE=1 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
1.000041 | 0.000001 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |
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