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CAZyme Information: MGYG000003355_01965

You are here: Home > Sequence: MGYG000003355_01965

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Lachnoclostridium phytofermentans_A
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lachnoclostridium; Lachnoclostridium phytofermentans_A
CAZyme ID MGYG000003355_01965
CAZy Family GH73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1257 137987.45 9.0538
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003355 5194070 MAG China Asia
Gene Location Start: 31544;  End: 35317  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003355_01965.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4193 LytD 3.73e-21 910 1147 45 244
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].
pfam08239 SH3_3 1.33e-08 330 389 1 54
Bacterial SH3 domain.
pfam08239 SH3_3 5.14e-08 142 201 1 54
Bacterial SH3 domain.
pfam08239 SH3_3 9.36e-07 526 585 1 54
Bacterial SH3 domain.
NF033186 internalin_K 5.13e-05 402 522 438 559
class 1 internalin InlK. Internalins, as found in the intracellular human pathogen Listeria monocytogenes, are paralogous surface-anchored proteins with an N-terminal signal peptide, leucine-rich repeats, and a C-terminal LPXTG processing and cell surface anchoring site. Members of this family are internalin K (InlK), a virulence factor. See articles PMID:17764999. for a general discussion of internalins, and PMID:21829365, PMID:22082958, and PMID:23958637 for more information about internalin K.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ABX43817.1 0.0 1 1257 15 1281
BCJ93456.1 2.74e-218 421 1255 60 895
QHQ61172.1 4.24e-200 516 1255 134 767
CUH91961.1 6.34e-199 523 1255 144 912
BCJ97942.1 2.48e-198 429 1255 60 907

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6FXO_A 4.01e-12 983 1147 92 243
ChainA, Bifunctional autolysin [Staphylococcus aureus subsp. aureus Mu50]
4PI7_A 6.03e-08 983 1136 84 216
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PI9_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PIA_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]
4PI8_A 3.58e-07 983 1136 84 216
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8CPQ1 2.11e-12 913 1147 1128 1334
Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=atl PE=3 SV=1
O33635 4.75e-12 913 1147 1128 1334
Bifunctional autolysin OS=Staphylococcus epidermidis OX=1282 GN=atl PE=1 SV=1
Q5HQB9 4.75e-12 913 1147 1128 1334
Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=atl PE=3 SV=1
Q99V41 2.71e-10 983 1147 1096 1247
Bifunctional autolysin OS=Staphylococcus aureus (strain N315) OX=158879 GN=atl PE=1 SV=1
Q6GI31 2.71e-10 983 1147 1105 1256
Bifunctional autolysin OS=Staphylococcus aureus (strain MRSA252) OX=282458 GN=atl PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000379 0.998901 0.000191 0.000193 0.000152 0.000145

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003355_01965.