CAZyme Information: MGYG000003358_01702

Basic Information

• Species: Kluyvera ascorbata
• Lineage: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Kluyvera; Kluyvera ascorbata
• CAZyme ID: MGYG000003358_01702
• CAZy Family: PL22
• CAZyme Description: Oligogalacturonate lyase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
375	MGYG000003358_76|CGC2	43222.39	5.6731

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003358	4968008	MAG	United States	North America

• Gene Location: Start: 64884; End: 66011 Strand: +

Full Sequence      

MKGKIIPLNFRTQKDSETGHEVIRMTPPHIICHRNYFYQKCFTRDGGKLIFGGAFEGHWN
YYLLDIAAQQATQLTDGAGDNTFGGFLSDDDKSLWYVKDTRQLRRVDLTTLEEYVVYEVD
DEWVAYGTWVANADCTKLVGIEIKKSDWQPLTDWSKFRAYYFTNPECRLINIDLKTGEQR
TILQEKRWLGHPIYRPFDDKTVAFCHEGPRDAIDARMWLINEDGSDMRCVRQHQQGESFT
HEFWVPDGSALYYVAHQENSPHRYLYSADPATLENRQLMEIPPCSHLMSNHDGSRVVGDG
APHNTGDISLNDPFIWVFDLKTGEKKAICQHNSSWKVLDGDRQVTHPHPSFSPDGEWVLY
TSDAEGMPALYLARV

Enzyme Prediction     

EC	4.2.2.6

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL22	214	375	4.3e-59	0.630188679245283
PL22	32	138	2.4e-28	0.9811320754716981

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam14583	Pectate_lyase22	0.0	2	375	3	382	Oligogalacturonate lyase. This is a family of oligogalacturonate lyases, referred to more generally as pectate lyase family 22. These proteins fold into 7-bladed beta-propellers.
COG0823	TolB	2.56e-33	33	374	92	400	Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport].
PRK03629	tolB	6.63e-05	244	371	206	314	Tol-Pal system protein TolB.
PRK04922	tolB	1.24e-04	244	371	211	319	Tol-Pal system beta propeller repeat protein TolB.
PRK05137	tolB	4.78e-04	197	371	164	317	Tol-Pal system protein TolB.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BBV64471.1	1.42e-299	1	375	1	375
BBQ82415.1	7.82e-288	1	375	1	375
BBR19454.1	7.82e-288	1	375	1	375
BBR57598.1	2.24e-287	1	375	1	375
BBT00420.1	2.24e-287	1	375	1	375

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3PE7_A	9.08e-202	2	375	3	382	Oligogalacturonatelyase in complex with manganese [Yersinia enterocolitica subsp. enterocolitica 8081]
3C5M_A	9.65e-180	2	375	3	382	Crystalstructure of oligogalacturonate lyase (VPA0088) from Vibrio parahaemolyticus. Northeast Structural Genomics Consortium Target VpR199 [Vibrio parahaemolyticus RIMD 2210633],3C5M_B Crystal structure of oligogalacturonate lyase (VPA0088) from Vibrio parahaemolyticus. Northeast Structural Genomics Consortium Target VpR199 [Vibrio parahaemolyticus RIMD 2210633],3C5M_C Crystal structure of oligogalacturonate lyase (VPA0088) from Vibrio parahaemolyticus. Northeast Structural Genomics Consortium Target VpR199 [Vibrio parahaemolyticus RIMD 2210633]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P21258	1.50e-202	2	375	3	382	Oligogalacturonate lyase OS=Dickeya dadantii (strain 3937) OX=198628 GN=ogl PE=2 SV=2
Q59418	6.08e-202	2	375	3	382	Oligogalacturonide lyase OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) OX=218491 GN=ogl PE=4 SV=2

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000072	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000003358_01702.