CAZyme Information: MGYG000003367_00489

Basic Information

• Species: Bacteroides sp007896885
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides sp007896885
• CAZyme ID: MGYG000003367_00489
• CAZy Family: GH55
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1004	MGYG000003367_13|CGC5	113780.83	7.3605

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003367	3747359	MAG	United States	North America

• Gene Location: Start: 216406; End: 219420 Strand: +

Full Sequence      

MKKLNLILLVFWSIFHCQLYAVQLKSIYPQKPIDSEAYYFTPENYPIKADGKTDVSDALQ
TAINQVKKEKNFGILFIPEGKYKISKTIYIPGAIRLIGYGKNRPEFILAKSSPGYQKENP
DDKGKANYMFWFTGGMVEKGESPYDAGASTFYSAMSNINLRIEDGNPYAVALRTHYAQHS
FISYMAVYIGKGKAGLFDVGNEMENVAFYGGDYGIYTTKSSPGWPVMMVDSYFEGQRVAA
LRCQESGLAMVNLHAKNVPTVFKIDSNYCDKLFLENSYLENVDGPVVIITNENNSNNQIT
FRNVYCKNVPTLAKYTRSNTETNVAYPIYKVKSYDHGLQMDNLVDMPQYRTLLNTEPLQK
LPTAQVMDIPTLPAMETWANLRDLGAKGDGTTDDTHAIQAAIDKYDNIYVPQGWYRITET
LKMKPNTKLIGLHPFGTQFFLDESSPAFSGFGSPKALVESSVGGTNILTGIGINTGGINY
RAVGVKWMANANSYINDVKFVGGHGGMWKPKPGVAAPKGWWDRPPRVSTPDNPVTEAGMD
LAWDNQYWSLWVTNNGGGTFKDIWTASTYATNGFYASNTTTPGRIYAMSLEHHVRNEVRF
NKVHNWKIYCMQTEEESRESSDCQPIEMDSCKDMTFANLYMFRVIRINKPYHSSVRIRNC
ENIAFLNLHNYSQIKYTNNYAAFDVNKNINIRPWELSRLIVTGKEPHQQPLNKEINNVNE
LASDFEFAEGITHDSKGNIFFCDQRMRRIYKWSTDTNSLSLIADFPWKPSNLAFDSEDNL
LVLFRYDAQPSYLINGKPEEMPSMPDSKGTSFSGYGNSRYTMRVYSINPNNPEESIKLLP
RIAMGQVKDVYKALYPSNRWRDFHDFNEVSVYVPEMCFLAPDGKTIIPHYFDLSRSSSLL
EAYPGKPFYTSDEYDRRMVKMDVAKDGTLSNLRYFVEQGEFGSAVDKEGNLYVTDGDIYI
FDKDAKAKGVIHVPERPSTMQFGGKDNNALFITGRSKLFGVRIK

Enzyme Prediction     

No EC number prediction in MGYG000003367_00489.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH55	42	678	2e-87	0.8567567567567568

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam12708	Pectate_lyase_3	1.18e-14	45	217	7	171	Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
pfam12708	Pectate_lyase_3	4.01e-11	378	431	1	60	Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
COG3386	YvrE	1.01e-10	718	994	17	274	Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism].
COG5434	Pgu1	5.12e-10	342	489	44	222	Polygalacturonase [Carbohydrate transport and metabolism].
pfam08450	SGL	8.45e-10	905	993	145	243	SMP-30/Gluconolaconase/LRE-like region. This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30), gluconolactonase and luciferin-regenerating enzyme (LRE). SMP-30 is known to hydrolyze diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 and LRE.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QUU00135.1	0.0	1	1004	1	1005
QPH57852.1	0.0	1	1004	1	1004
QBJ17509.1	0.0	1	1004	1	1004
QUT68914.1	0.0	1	1004	1	1004
BBK89258.1	0.0	1	1004	1	1004

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5M5Z_A	5.53e-07	43	446	32	459	ChainA, Beta-1,3-glucanase [Thermochaetoides thermophila],5M60_A Chain A, Beta-1,3-glucanase [Thermochaetoides thermophila]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.004356	0.900568	0.094168	0.000309	0.000279	0.000283

TMHMM  Annotations     

There is no transmembrane helices in MGYG000003367_00489.