Species | Phytobacter sp002377245 | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Phytobacter; Phytobacter sp002377245 | |||||||||||
CAZyme ID | MGYG000003377_04064 | |||||||||||
CAZy Family | GH28 | |||||||||||
CAZyme Description | hypothetical protein | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 183995; End: 185323 Strand: + |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GH28 | 50 | 409 | 2.1e-77 | 0.9292307692307692 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
COG5434 | Pgu1 | 4.02e-58 | 12 | 393 | 66 | 466 | Polygalacturonase [Carbohydrate transport and metabolism]. |
PLN02218 | PLN02218 | 2.79e-34 | 22 | 404 | 64 | 409 | polygalacturonase ADPG |
pfam00295 | Glyco_hydro_28 | 1.83e-31 | 64 | 378 | 12 | 272 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
PLN02793 | PLN02793 | 1.63e-26 | 31 | 408 | 58 | 399 | Probable polygalacturonase |
PLN02188 | PLN02188 | 6.78e-26 | 30 | 414 | 41 | 395 | polygalacturonase/glycoside hydrolase family protein |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
AMO47306.1 | 1.44e-269 | 1 | 442 | 1 | 442 |
QDY44470.1 | 1.83e-230 | 6 | 442 | 1 | 437 |
QEW33161.1 | 7.94e-229 | 26 | 442 | 375 | 791 |
CAX58716.1 | 4.54e-228 | 26 | 442 | 375 | 791 |
QBR50864.1 | 2.59e-227 | 26 | 442 | 375 | 791 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
1BHE_A | 1.63e-41 | 23 | 345 | 12 | 320 | ChainA, POLYGALACTURONASE [Pectobacterium carotovorum] |
3JUR_A | 2.06e-36 | 31 | 404 | 33 | 411 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
5OLP_A | 7.50e-23 | 31 | 403 | 50 | 425 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
2UVE_A | 5.09e-19 | 22 | 401 | 148 | 564 | Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica] |
2IQ7_A | 1.74e-15 | 168 | 388 | 96 | 317 | Crystalstructure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_B Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_C Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_D Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_E Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_F Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_G Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
P18192 | 2.94e-41 | 22 | 345 | 37 | 346 | Endo-polygalacturonase OS=Pectobacterium carotovorum subsp. carotovorum OX=555 GN=peh PE=3 SV=1 |
P26509 | 1.52e-40 | 23 | 345 | 38 | 346 | Endo-polygalacturonase OS=Pectobacterium parmentieri OX=1905730 GN=pehA PE=1 SV=1 |
A7PZL3 | 5.42e-35 | 31 | 403 | 68 | 424 | Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 |
Q8RY29 | 5.26e-29 | 23 | 343 | 65 | 359 | Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2 |
P43212 | 7.47e-26 | 29 | 348 | 62 | 355 | Polygalacturonase OS=Cryptomeria japonica OX=3369 PE=1 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
0.000214 | 0.999105 | 0.000192 | 0.000165 | 0.000149 | 0.000136 |
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