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CAZyme Information: MGYG000003378_01507

You are here: Home > Sequence: MGYG000003378_01507

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Chimaeribacter arupi
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Chimaeribacter; Chimaeribacter arupi
CAZyme ID MGYG000003378_01507
CAZy Family CBM5
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1049 112904.92 4.6841
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003378 4918955 MAG United States North America
Gene Location Start: 47779;  End: 50928  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003378_01507.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
NF033913 fibronec_FbpA 4.07e-09 107 206 183 280
LPXTG-anchored fibronectin-binding protein FbpA. FbpA, a fibronectin-binding protein described in Streptococcus pyogenes, has a YSIRK-type (crosswall-targeting) signal peptide and a C-terminal LPXTG motif for covalent attachment to the cell wall. It is unrelated to the PavA-like protein from Streptococcus gordonii (see BlastRule NBR009716) that was given the identical name, so the phase LPXTG-anchored is added to the protein name for clarity.
NF033201 Vip_LPXTG_Lm 9.92e-09 125 207 264 349
cell invasion LPXTG protein Vip. Vip (Virulence protein), like the LPXTG-type internalins, is an LPXTG-anchored surface protein of the mammalian cell-invading pathogen Listeria monocytogenes, but absent from the related species Listeria innocua. For certain cell types, Vip is required for Listeria's ability to invade. It appears to bind the endoplasmic reticulum (ER) resident chaperone Gp96 as its receptor.
NF033913 fibronec_FbpA 1.96e-08 120 225 202 317
LPXTG-anchored fibronectin-binding protein FbpA. FbpA, a fibronectin-binding protein described in Streptococcus pyogenes, has a YSIRK-type (crosswall-targeting) signal peptide and a C-terminal LPXTG motif for covalent attachment to the cell wall. It is unrelated to the PavA-like protein from Streptococcus gordonii (see BlastRule NBR009716) that was given the identical name, so the phase LPXTG-anchored is added to the protein name for clarity.
NF033201 Vip_LPXTG_Lm 1.62e-07 131 199 258 321
cell invasion LPXTG protein Vip. Vip (Virulence protein), like the LPXTG-type internalins, is an LPXTG-anchored surface protein of the mammalian cell-invading pathogen Listeria monocytogenes, but absent from the related species Listeria innocua. For certain cell types, Vip is required for Listeria's ability to invade. It appears to bind the endoplasmic reticulum (ER) resident chaperone Gp96 as its receptor.
PRK07003 PRK07003 2.23e-07 122 217 451 551
DNA polymerase III subunit gamma/tau.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AXM87141.1 2.67e-163 207 1044 39 864
AXM83859.1 2.67e-163 207 1044 39 864
AXM49813.1 2.67e-163 207 1044 39 864
AUB86030.1 2.67e-163 207 1044 39 864
AXM80558.1 2.67e-163 207 1044 39 864

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.994111 0.005878 0.000026 0.000012 0.000006 0.000013

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003378_01507.