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CAZyme Information: MGYG000003383_00278

You are here: Home > Sequence: MGYG000003383_00278

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bifidobacterium scardovii
Lineage Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium scardovii
CAZyme ID MGYG000003383_00278
CAZy Family GT32
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
285 MGYG000003383_10|CGC2 33812.41 6.6018
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003383 3123324 MAG United States North America
Gene Location Start: 22050;  End: 22907  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003383_00278.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT32 61 136 4.9e-16 0.8888888888888888

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam05704 Caps_synth 3.77e-53 9 264 22 267
Capsular polysaccharide synthesis protein. This family consists of several capsular polysaccharide proteins. Capsular polysaccharide (CPS) is a major virulence factor in Streptococcus pneumoniae.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
SDO63469.1 4.48e-202 1 285 25 309
QOL32683.1 3.19e-68 12 281 32 303
QUF86155.1 5.31e-63 44 282 69 307
QOL44321.1 5.31e-63 44 282 69 307
VEG43841.1 2.12e-62 44 282 69 307

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000085 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003383_00278.