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CAZyme Information: MGYG000003383_00675

You are here: Home > Sequence: MGYG000003383_00675

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bifidobacterium scardovii
Lineage Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium scardovii
CAZyme ID MGYG000003383_00675
CAZy Family GH146
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
633 MGYG000003383_12|CGC1 68867.42 4.8456
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003383 3123324 MAG United States North America
Gene Location Start: 17267;  End: 19168  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003383_00675.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH146 11 538 2.5e-135 0.9980119284294234

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07944 Glyco_hydro_127 1.14e-105 11 538 1 503
Beta-L-arabinofuranosidase, GH127. One member of this family, from Bidobacterium longicum, UniProtKB:E8MGH8, has been characterized as an unusual beta-L-arabinofuranosidase enzyme, EC:3.2.1.185. It rleases l-arabinose from the l-arabinofuranose (Araf)-beta1,2-Araf disaccharide and also transglycosylates 1-alkanols with retention of the anomeric configuration. Terminal beta-l-arabinofuranosyl residues have been found in arabinogalactan proteins from a mumber of different plantt species. beta-l-Arabinofuranosyl linkages with 1-4 arabinofuranosides are also found in the sugar chains of extensin and solanaceous lectins, hydroxyproline (Hyp)2-rich glycoproteins that are widely observed in plant cell wall fractions. The critical residue for catalytic activity is Glu-338, in a ET/SCAS sequence context.
COG3533 COG3533 8.75e-52 12 539 12 502
Uncharacterized conserved protein, DUF1680 family [Function unknown].
COG1331 YyaL 0.004 246 362 416 510
Uncharacterized conserved protein YyaL, SSP411 family, contains thoiredoxin and six-hairpin glycosidase-like domains [General function prediction only].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BAQ31701.1 0.0 1 633 1 633
QJD84046.1 1.10e-189 4 608 2 588
ACL75359.1 1.71e-175 4 604 2 583
QUL57122.1 5.81e-175 4 601 2 548
AFC85802.1 2.01e-92 2 539 57 565

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6YQH_AAA 1.36e-43 7 538 28 560
ChainAAA, Acetyl-CoA carboxylase, biotin carboxylase [Bacteroides thetaiotaomicron VPI-5482]
5OPJ_A 9.55e-41 7 538 28 560
Beta-L-arabinofuranosidase[Bacteroides thetaiotaomicron]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000048 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003383_00675.