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CAZyme Information: MGYG000003383_01186

You are here: Home > Sequence: MGYG000003383_01186

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bifidobacterium scardovii
Lineage Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium scardovii
CAZyme ID MGYG000003383_01186
CAZy Family GH115
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
671 MGYG000003383_17|CGC1 76476.65 4.5927
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003383 3123324 MAG United States North America
Gene Location Start: 82394;  End: 84409  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003383_01186.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH115 54 451 4.3e-68 0.5423242467718795

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam15979 Glyco_hydro_115 5.35e-51 118 442 1 327
Glycosyl hydrolase family 115. Glyco_hydro_115 is a family of glycoside hydrolases likely to have the activity of xylan a-1,2-glucuronidase, EC:3.2.1.131, or a-(4-O-methyl)-glucuronidase EC:3.2.1.-.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BAQ31775.1 0.0 1 671 1 671
QSY57611.1 0.0 1 671 1 671
QTB90647.1 0.0 61 671 1 611
AFU71826.1 7.28e-285 1 667 1 670
ATO41651.1 7.28e-285 1 667 1 670

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6NPS_A 6.69e-13 66 413 113 473
Crystalstructure of GH115 enzyme AxyAgu115A from Amphibacillus xylanus [Amphibacillus xylanus NBRC 15112],6NPS_B Crystal structure of GH115 enzyme AxyAgu115A from Amphibacillus xylanus [Amphibacillus xylanus NBRC 15112]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.991432 0.008561 0.000014 0.000013 0.000008 0.000011

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003383_01186.