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CAZyme Information: MGYG000003383_01286

You are here: Home > Sequence: MGYG000003383_01286

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bifidobacterium scardovii
Lineage Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium scardovii
CAZyme ID MGYG000003383_01286
CAZy Family GH3
CAZyme Description Beta-glucosidase BoGH3B
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
752 MGYG000003383_17|CGC5 78573.03 4.7989
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003383 3123324 MAG United States North America
Gene Location Start: 221502;  End: 223760  Strand: -

Full Sequence      Download help

MTTGSGTIDR  LIASMSFTEK  VGQLNQRLLG  WRAVGRDAGG  RLVATDELKR  EIDRWGGLGT60
LYGLLRADPW  SGQHWGNGIR  PEERPEAVAL  VQETVLARGA  HGIGTLLSEE  APHGHQALGG120
TVLPTNLALG  ATFDPQAVCE  AEAAVAAELA  ASGVHIALVS  GLDIARDPRW  GRCEECFGED180
PLMAARLCEA  IVTGMQGERR  ATVGKGGVAV  VLKHLAAQGE  AVGGRNGQSA  VVGEHDLREI240
HLPPVEAGVR  AGAWGFMAAY  NDIDSVPCCA  NPWLLRTYLR  GELGFDGVVM  ADGLAVDRLA300
DMAGSIPAAG  RAALLAGVDI  SLWDRGFASL  EEYADDEAVA  AAVDASLRRV  LELKRAFGLL360
PADGDTAMTV  PDLPADRIAR  AIAVTHERSR  EMARESLTLL  KGDEALGGIR  TLLAGTPAQG420
GTVVVSGPFA  DDFGCFLGDY  TAPVPEGERT  SVYRELCRRY  GADRVRLAPD  PGDLPEDVWA480
QAAAVVFVCG  GTSERSYDSA  FDDNGAAKAV  PEHGATCGEG  VDLSDIGLPW  GQDARLEAIA540
ARTGAPIVSV  AVCGRAHVLT  RVMDRSAVVV  WAGYAGQYGP  QAVADALAGG  AALPGRLPVT600
LPAYPAAVPV  RYNDRQGAAH  VYRDADEPVL  LPFGFGLGAL  AGVTVDDMRA  AADAGSETLA660
VTLAVSAGPS  GARGALNLFA  HCVGGHRVPR  LSMLVGSEYL  RLEAGQRREV  RMAVPFPSLM720
DAGDGMVRVR  LTALGRTIDV  DVDVDVDVAR  GR752

Enzyme Prediction      help

No EC number prediction in MGYG000003383_01286.

CAZyme Signature Domains help

Created with Snap3775112150188225263300338376413451488526564601639676714101322GH3
Family Start End Evalue family coverage
GH3 101 322 5.4e-60 0.9629629629629629

CDD Domains      download full data without filtering help

Created with Snap377511215018822526330033837641345148852656460163967671481442BglX8711PRK1509877324Glyco_hydro_3162637PLN03080417638Glyco_hydro_3_C
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG1472 BglX 3.89e-49 81 442 43 373
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
PRK15098 PRK15098 3.52e-47 8 711 38 722
beta-glucosidase BglX.
pfam00933 Glyco_hydro_3 4.49e-36 77 324 37 285
Glycosyl hydrolase family 3 N terminal domain.
PLN03080 PLN03080 1.09e-18 162 637 158 631
Probable beta-xylosidase; Provisional
pfam01915 Glyco_hydro_3_C 1.64e-11 417 638 14 215
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.

CAZyme Hits      help

Created with Snap37751121501882252633003383764134514885265646016396767141752BAQ31884.1|GH31735QRI56690.1|GH31735QUI43928.1|GH31735BAJ71451.1|GH31735AUD81249.1|GH3
Hit ID E-Value Query Start Query End Hit Start Hit End
BAQ31884.1 0.0 1 752 1 750
QRI56690.1 0.0 1 735 1 736
QUI43928.1 0.0 1 735 1 736
BAJ71451.1 0.0 1 735 1 736
AUD81249.1 0.0 1 735 1 736

PDB Hits      download full data without filtering help

Created with Snap377511215018822526330033837641345148852656460163967671487145XXL_A87145XXN_A856375Z9S_A87145TF0_A87106R5I_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5XXL_A 2.33e-53 8 714 14 712
Crystalstructure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXL_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXM_A Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482],5XXM_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482]
5XXN_A 1.08e-52 8 714 14 712
CrystalStructure of mutant (D286N) beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorose [Bacteroides thetaiotaomicron VPI-5482],5XXN_B Crystal Structure of mutant (D286N) beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorose [Bacteroides thetaiotaomicron VPI-5482],5XXO_A Crystal structure of mutant (D286N) GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorotriose [Bacteroides thetaiotaomicron VPI-5482],5XXO_B Crystal structure of mutant (D286N) GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorotriose [Bacteroides thetaiotaomicron VPI-5482]
5Z9S_A 1.11e-47 85 637 71 661
Functionaland Structural Characterization of a beta-Glucosidase Involved in Saponin Metabolism from Intestinal Bacteria [Bifidobacterium longum],5Z9S_B Functional and Structural Characterization of a beta-Glucosidase Involved in Saponin Metabolism from Intestinal Bacteria [Bifidobacterium longum]
5TF0_A 1.70e-45 8 714 13 711
CrystalStructure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393],5TF0_B Crystal Structure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393]
6R5I_A 1.60e-44 8 710 7 689
ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5I_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]

Swiss-Prot Hits      download full data without filtering help

Created with Snap377511215018822526330033837641345148852656460163967671411719sp|Q56078|BGLX_SALTY8719sp|P33363|BGLX_ECOLI86637sp|T2KMH0|PLH24_FORAG58637sp|A7LXU3|BGH3B_BACO18729sp|T2KMH9|PLH34_FORAG
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q56078 4.59e-44 11 719 41 730
Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2
P33363 7.00e-42 8 719 38 730
Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2
T2KMH0 4.36e-40 86 637 48 602
Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1
A7LXU3 1.56e-35 58 637 81 657
Beta-glucosidase BoGH3B OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02659 PE=1 SV=1
T2KMH9 7.28e-32 8 729 40 730
Putative beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22230 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000052 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003383_01286.