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CAZyme Information: MGYG000003383_01295

You are here: Home > Sequence: MGYG000003383_01295

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bifidobacterium scardovii
Lineage Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium scardovii
CAZyme ID MGYG000003383_01295
CAZy Family GH5
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
427 MGYG000003383_17|CGC5 47093.94 4.787
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003383 3123324 MAG United States North America
Gene Location Start: 231902;  End: 233185  Strand: -

Full Sequence      Download help

MRFGVNYTPS  HGWFHAWLDP  DWESVAKDLD  QIAALGLDHV  RIFPVWPILQ  PNRTWINGKG60
LDDVRTMCDI  AGKAGLDVFC  DVFQGHLSSF  DFIPSWLVTW  HDRSMFTDAQ  AVEAEARLVS120
AVYDALDDLP  NFRGLTLGNE  CNQFADRSHP  HRMAADETGA  GQWIDAMMSP  IRDRAAASGR180
VLLHSENDGV  WYMDGHPFAP  RQASNLGDVA  TVHSWVFNGT  AQRYGGMSPA  SVMHAAYLVE240
LAKAFTHDAG  HQVWLQEVGA  PENVVDRADA  AEFCRRTVEH  ALRCDRLYGI  TWWCSHDVSR300
AMSDFPPFEH  ALGLFDEQGN  AKPLAKVLAE  FAANKDAVVP  ERRGKAIVIP  VDDHELPLCR360
LACAPGGSIF  ERWMAMEEAG  EHPALISSTL  AADPAELERR  GIDECVTCDL  VAGGAYSAVS420
DPSLARD427

Enzyme Prediction      help

No EC number prediction in MGYG000003383_01295.

CAZyme Signature Domains help

Created with Snap2142648510612814917019221323425627729832034136238440515298GH5
Family Start End Evalue family coverage
GH5 15 298 6.4e-124 0.9964539007092199

CDD Domains      help

MGYG000003383_01295 has no CDD domain.

CAZyme Hits      help

Created with Snap214264851061281491701922132342562772983203413623844051427BAQ31892.1|GH5_181424QOL31860.1|GH5_181426QYN60174.1|GH5_181427ATO41093.1|GH5_181427AFU71154.1|GH5_18
Hit ID E-Value Query Start Query End Hit Start Hit End
BAQ31892.1 0.0 1 427 1 427
QOL31860.1 1.70e-203 1 424 1 425
QYN60174.1 2.64e-195 1 426 1 427
ATO41093.1 7.54e-195 1 427 1 428
AFU71154.1 7.54e-195 1 427 1 428

PDB Hits      download full data without filtering help

Created with Snap2142648510612814917019221323425627729832034136238440514236MP2_A14236MOY_A14237LR1_A14237LR6_A24267LQX_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
6MP2_A 3.37e-180 1 423 21 443
Crystalstructure of BlMan5B solved by SIRAS [Bifidobacterium longum DJO10A],6MP2_B Crystal structure of BlMan5B solved by SIRAS [Bifidobacterium longum DJO10A],6MPA_A Chain A, BlMan5B [Bifidobacterium longum DJO10A],6MPA_B Chain B, BlMan5B [Bifidobacterium longum DJO10A]
6MOY_A 2.75e-179 1 423 21 443
Crystalstructure of the E257A mutant of BlMan5B in complex with GlcNAc (co-crystallization) [Bifidobacterium longum DJO10A],6MOY_B Crystal structure of the E257A mutant of BlMan5B in complex with GlcNAc (co-crystallization) [Bifidobacterium longum DJO10A],6MP7_A Crystal structure of the E257A mutant of BlMan5B in complex with GlcNAc (soaking) [Bifidobacterium longum DJO10A],6MP7_B Crystal structure of the E257A mutant of BlMan5B in complex with GlcNAc (soaking) [Bifidobacterium longum DJO10A],6MPC_A Crystal structure of E257A mutant of BlMan5B [Bifidobacterium longum DJO10A],6MPC_B Crystal structure of E257A mutant of BlMan5B [Bifidobacterium longum DJO10A]
7LR1_A 5.85e-173 1 423 21 441
ChainA, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR1_B Chain B, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR1_C Chain C, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR1_D Chain D, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR2_A Chain A, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR2_B Chain B, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR2_C Chain C, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR2_D Chain D, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813]
7LR6_A 4.76e-172 1 423 21 441
ChainA, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR6_B Chain B, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR6_C Chain C, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR6_D Chain D, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813]
7LQX_A 3.25e-171 2 426 25 447
ChainA, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000056 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003383_01295.