CAZyme Information: MGYG000003383_01295

Basic Information

• Species: Bifidobacterium scardovii
• Lineage: Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium scardovii
• CAZyme ID: MGYG000003383_01295
• CAZy Family: GH5
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
427	MGYG000003383_17|CGC5	47093.94	4.787

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003383	3123324	MAG	United States	North America

• Gene Location: Start: 231902; End: 233185 Strand: -

Full Sequence      

MRFGVNYTPSHGWFHAWLDPDWESVAKDLDQIAALGLDHVRIFPVWPILQPNRTWINGKG
LDDVRTMCDIAGKAGLDVFCDVFQGHLSSFDFIPSWLVTWHDRSMFTDAQAVEAEARLVS
AVYDALDDLPNFRGLTLGNECNQFADRSHPHRMAADETGAGQWIDAMMSPIRDRAAASGR
VLLHSENDGVWYMDGHPFAPRQASNLGDVATVHSWVFNGTAQRYGGMSPASVMHAAYLVE
LAKAFTHDAGHQVWLQEVGAPENVVDRADAAEFCRRTVEHALRCDRLYGITWWCSHDVSR
AMSDFPPFEHALGLFDEQGNAKPLAKVLAEFAANKDAVVPERRGKAIVIPVDDHELPLCR
LACAPGGSIFERWMAMEEAGEHPALISSTLAADPAELERRGIDECVTCDLVAGGAYSAVS
DPSLARD

Enzyme Prediction     

No EC number prediction in MGYG000003383_01295.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH5	15	298	6.4e-124	0.9964539007092199

CDD Domains     

MGYG000003383_01295 has no CDD domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BAQ31892.1	0.0	1	427	1	427
QOL31860.1	1.70e-203	1	424	1	425
QYN60174.1	2.64e-195	1	426	1	427
ATO41093.1	7.54e-195	1	427	1	428
AFU71154.1	7.54e-195	1	427	1	428

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6MP2_A	3.37e-180	1	423	21	443	Crystalstructure of BlMan5B solved by SIRAS [Bifidobacterium longum DJO10A],6MP2_B Crystal structure of BlMan5B solved by SIRAS [Bifidobacterium longum DJO10A],6MPA_A Chain A, BlMan5B [Bifidobacterium longum DJO10A],6MPA_B Chain B, BlMan5B [Bifidobacterium longum DJO10A]
6MOY_A	2.75e-179	1	423	21	443	Crystalstructure of the E257A mutant of BlMan5B in complex with GlcNAc (co-crystallization) [Bifidobacterium longum DJO10A],6MOY_B Crystal structure of the E257A mutant of BlMan5B in complex with GlcNAc (co-crystallization) [Bifidobacterium longum DJO10A],6MP7_A Crystal structure of the E257A mutant of BlMan5B in complex with GlcNAc (soaking) [Bifidobacterium longum DJO10A],6MP7_B Crystal structure of the E257A mutant of BlMan5B in complex with GlcNAc (soaking) [Bifidobacterium longum DJO10A],6MPC_A Crystal structure of E257A mutant of BlMan5B [Bifidobacterium longum DJO10A],6MPC_B Crystal structure of E257A mutant of BlMan5B [Bifidobacterium longum DJO10A]
7LR1_A	5.85e-173	1	423	21	441	ChainA, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR1_B Chain B, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR1_C Chain C, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR1_D Chain D, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR2_A Chain A, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR2_B Chain B, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR2_C Chain C, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR2_D Chain D, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813]
7LR6_A	4.76e-172	1	423	21	441	ChainA, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR6_B Chain B, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR6_C Chain C, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR6_D Chain D, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813]
7LQX_A	3.25e-171	2	426	25	447	ChainA, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000056	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000003383_01295.