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CAZyme Information: MGYG000003383_01623
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Bifidobacterium scardovii | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium scardovii | |||||||||||
| CAZyme ID | MGYG000003383_01623 | |||||||||||
| CAZy Family | GH2 | |||||||||||
| CAZyme Description | Beta-galactosidase BoGH2A | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 9356; End: 11962 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH2 | 4 | 583 | 3.6e-101 | 0.5877659574468085 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG3250 | LacZ | 2.94e-55 | 73 | 429 | 102 | 430 | Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism]. |
| PRK10150 | PRK10150 | 2.16e-37 | 53 | 436 | 61 | 452 | beta-D-glucuronidase; Provisional |
| PRK10340 | ebgA | 4.42e-27 | 57 | 428 | 113 | 472 | cryptic beta-D-galactosidase subunit alpha; Reviewed |
| PRK09525 | lacZ | 2.98e-23 | 57 | 428 | 124 | 485 | beta-galactosidase. |
| pfam02836 | Glyco_hydro_2_C | 8.31e-21 | 280 | 448 | 6 | 178 | Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| BAQ32418.1 | 0.0 | 1 | 868 | 1 | 868 |
| QOL35067.1 | 0.0 | 1 | 865 | 1 | 811 |
| QOL32321.1 | 0.0 | 1 | 865 | 1 | 814 |
| QTL78050.1 | 0.0 | 1 | 839 | 15 | 813 |
| QTL79929.1 | 0.0 | 1 | 839 | 15 | 813 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6B6L_A | 3.42e-104 | 4 | 842 | 37 | 754 | Thecrystal structure of glycosyl hydrolase family 2 (GH2) member from Bacteroides cellulosilyticus DSM 14838 [Bacteroides cellulosilyticus DSM 14838],6B6L_B The crystal structure of glycosyl hydrolase family 2 (GH2) member from Bacteroides cellulosilyticus DSM 14838 [Bacteroides cellulosilyticus DSM 14838] |
| 7RSK_A | 7.14e-104 | 4 | 842 | 37 | 754 | ChainA, Glycosyl hydrolase family 2, sugar binding domain protein [Bacteroides cellulosilyticus DSM 14838],7RSK_B Chain B, Glycosyl hydrolase family 2, sugar binding domain protein [Bacteroides cellulosilyticus DSM 14838] |
| 5T98_A | 4.12e-76 | 4 | 843 | 28 | 797 | Crystalstructure of BuGH2Awt [Bacteroides uniformis],5T98_B Crystal structure of BuGH2Awt [Bacteroides uniformis],5T99_A Crystal structure of BuGH2Awt in complex with Galactoisofagomine [Bacteroides uniformis],5T99_B Crystal structure of BuGH2Awt in complex with Galactoisofagomine [Bacteroides uniformis] |
| 4YPJ_A | 3.97e-70 | 4 | 840 | 10 | 782 | ChainA, Beta galactosidase [Niallia circulans],4YPJ_B Chain B, Beta galactosidase [Niallia circulans] |
| 7CWD_A | 8.05e-67 | 1 | 747 | 1 | 725 | ChainA, beta-glalactosidase [Niallia circulans],7CWI_A Chain A, beta-galactosidase [Niallia circulans] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A7LXS9 | 5.30e-72 | 5 | 863 | 46 | 844 | Beta-galactosidase BoGH2A OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02645 PE=1 SV=1 |
| T2KM09 | 1.77e-55 | 25 | 734 | 78 | 718 | Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22050 PE=2 SV=2 |
| T2KPJ7 | 9.23e-23 | 74 | 458 | 124 | 501 | Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_21970 PE=2 SV=1 |
| P05804 | 8.13e-21 | 30 | 436 | 36 | 448 | Beta-glucuronidase OS=Escherichia coli (strain K12) OX=83333 GN=uidA PE=1 SV=2 |
| Q6LL68 | 3.68e-20 | 57 | 428 | 120 | 479 | Beta-galactosidase OS=Photobacterium profundum (strain SS9) OX=298386 GN=lacZ PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.999745 | 0.000276 | 0.000011 | 0.000001 | 0.000000 | 0.000001 |