CAZyme Information: MGYG000003383_02236

Basic Information

• Species: Bifidobacterium scardovii
• Lineage: Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium scardovii
• CAZyme ID: MGYG000003383_02236
• CAZy Family: GH59
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
943	MGYG000003383_29|CGC2	103166.05	4.6082

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003383	3123324	MAG	United States	North America

• Gene Location: Start: 145050; End: 147881 Strand: -

Full Sequence      

MGDIQRPGEPRVDAKPVEVTVDAADVAAAARNRNGLTYKGFGLLSGNATSSLLMDYKAEH
PDVYWQLVETLFGGEHPLLNTVKVEMGNDRNNSTGPNVATMRDRDEYPSVTREPGFQLAA
DARRYQPGVRVSILRWMVPTWVHNNDDVYRWYKNTILAAYREYGFMVDSVNPDVNERTAD
LEWVSDFADRVRHDTEGFLGNGPDDPNAGFRSDAERDLFHRIKVITSDEEVTGTFGGDVI
ADPRYLDAMDVASYHYSVEDDKDGNFTRLSDEFDKEIWNSEAQAVFSNSADRPNNTMDNG
LGERTGTGIGGSGSPLEMANTLIKGFVESRRTHAIYQPAIGSCYENMEYASKELISARDP
WSGWIYYDAGCAALEHFTRFARLGWAPAAGAETPDRIWRAIPQSSGCEVGGNNPVSGARH
GEPSYLTLAAPDGTDFSMVIVNDSAYEKTYLVNVGTDLLAFGKPLQIWQTKAAGAGEAYD
ANWRKPVSIAPPHYHNTEDAADAESSQDFDGAQRTDHAQYTIVVEPWTMVTATTLDTVDI
AADGSYLPKPEYAHTLPHTAEDSRAVLGADAEDSSVLYADDFRYADAAAVPVYRFDALDQ
VDYLTSRGGEAGATPRYTTDTNGAFEVVPDAERGHALRQQIDWNHAGNAWIEGDPRTAIG
DMRWTNYRVSVDALFEEYPGRAPYMLLGAREMGGNKFTTDICGADFKIRADGVWLLRNFG
NEVRRGHLEDLKKRAAEAGAKPFVPGSGAWNTITLEVAGDTATVYVNGAKITSWSQPGLQ
SAGRVNLGTSFDHVRFSNLRVGRVAGFAPYYTQLIDDMHMTSWDDGSPVLKYSGPWTHDN
GQGMFTYMRTISRASTMGASLTYAFTGTGVDLFGPSDGKAKLDVYVDGKLAKAAAPVAPT
SGSLRCQFQLHDLPFGAHTVTFRTENGADFALDALGVLGAIAA

Enzyme Prediction     

EC	3.2.1.23

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH59	33	801	3.6e-176	0.9904912836767037

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam02057	Glyco_hydro_59	1.27e-78	38	379	1	293	Glycosyl hydrolase family 59.
pfam06439	DUF1080	0.002	748	801	120	181	Domain of Unknown Function (DUF1080). This family has structural similarity to an endo-1,3-1,4-beta glucanase belonging to glycoside hydrolase family 16. However, the structure surrounding the active site differs from that of the endo-1,3-1,4-beta glucanase.
pfam17996	CE2_N	0.003	858	925	19	85	Carbohydrate esterase 2 N-terminal. This is the N-terminal beta-sheet domain with jelly roll topology found in CE2 acetyl-esterase from the bacterium Clostridium thermocellum. This enzyme displays dual activities, it catalyses the deacetylation of plant polysaccharides and also potentiates the activity of its appended cellulase catalytic module through its noncatalytic cellulose binding function. This N-terminal jelly-roll domain appears to extend the substrate/cellulose binding cleft of the catalytic domain in C.thermocellum.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BAQ32326.1	0.0	1	936	1	936
QOL32584.1	0.0	19	938	8	907
AHJ22592.1	0.0	17	938	12	912
AUD98718.1	0.0	17	938	12	912
AUD76280.1	0.0	17	938	12	912

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q0VA39	1.30e-12	35	801	44	672	Galactocerebrosidase OS=Xenopus tropicalis OX=8364 GN=galc PE=2 SV=1
Q498K0	5.13e-12	35	801	44	671	Galactocerebrosidase OS=Xenopus laevis OX=8355 GN=galc PE=2 SV=2

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000041	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000003383_02236.