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CAZyme Information: MGYG000003383_02421

You are here: Home > Sequence: MGYG000003383_02421

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bifidobacterium scardovii
Lineage Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium scardovii
CAZyme ID MGYG000003383_02421
CAZy Family GH26
CAZyme Description Mannan endo-1,4-beta-mannosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
795 MGYG000003383_34|CGC3 85317.74 4.2946
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003383 3123324 MAG United States North America
Gene Location Start: 69393;  End: 71780  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003383_02421.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH26 53 371 5.2e-61 0.9108910891089109
CBM23 519 682 2.7e-36 0.9876543209876543

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam02156 Glyco_hydro_26 1.23e-43 53 354 2 299
Glycosyl hydrolase family 26.
COG4124 ManB2 1.15e-18 153 331 117 299
Beta-mannanase [Carbohydrate transport and metabolism].
pfam03425 CBM_11 4.71e-08 520 682 7 172
Carbohydrate binding domain (family 11).
pfam04886 PT 3.77e-04 714 744 1 33
PT repeat. This short repeat is composed on the tetrapeptide XPTX. This repeat is found in a variety of proteins, however it is not clear if these repeats are homologous to each other. The alignment represents nine copies of this repeat.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BAQ30247.1 0.0 1 795 1 795
ASR56276.1 1.86e-163 10 687 11 694
CQR64988.1 1.76e-160 5 680 4 668
QTL79031.1 1.54e-159 47 687 38 703
AEI10833.1 2.51e-159 20 687 28 700

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2BVT_A 6.23e-105 48 501 5 458
Thestructure of a modular endo-beta-1,4-mannanase from Cellulomonas fimi explains the product specificity of glycoside hydrolase family 26 mannanases. [Cellulomonas fimi],2BVT_B The structure of a modular endo-beta-1,4-mannanase from Cellulomonas fimi explains the product specificity of glycoside hydrolase family 26 mannanases. [Cellulomonas fimi],2BVY_A The structure and characterization of a modular endo-beta-1,4-mannanase from Cellulomonas fimi [Cellulomonas fimi]
2X2Y_A 5.11e-103 48 501 5 458
Cellulomonasfimi endo-beta-1,4-mannanase double mutant [Cellulomonas fimi],2X2Y_B Cellulomonas fimi endo-beta-1,4-mannanase double mutant [Cellulomonas fimi]
3TP4_A 1.94e-91 48 501 5 458
CrystalStructure of engineered protein at the resolution 1.98A, Northeast Structural Genomics Consortium Target OR128 [synthetic construct],3TP4_B Crystal Structure of engineered protein at the resolution 1.98A, Northeast Structural Genomics Consortium Target OR128 [synthetic construct]
4YN5_A 3.91e-84 51 380 51 387
Catalyticdomain of Bacillus sp. JAMB-750 GH26 Endo-beta-1,4-mannanase [Bacillus sp. JAMB750]
1J9Y_A 1.49e-70 48 411 8 362
Crystalstructure of mannanase 26A from Pseudomonas cellulosa [Cellvibrio japonicus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A1A278 1.21e-151 47 687 38 703
Mannan endo-1,4-beta-mannosidase OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) OX=367928 GN=BAD_1030 PE=1 SV=1
P49424 2.34e-69 48 411 46 400
Mannan endo-1,4-beta-mannosidase OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=manA PE=1 SV=2
O05512 9.23e-18 99 294 79 272
Mannan endo-1,4-beta-mannosidase OS=Bacillus subtilis (strain 168) OX=224308 GN=gmuG PE=1 SV=2
P55278 7.33e-16 40 293 18 269
Mannan endo-1,4-beta-mannosidase OS=Bacillus subtilis OX=1423 PE=3 SV=1
Q5AWB7 7.41e-14 82 367 82 319
Probable mannan endo-1,4-beta-mannosidase E OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=manE PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.002356 0.962809 0.000801 0.033383 0.000404 0.000208

TMHMM  Annotations      download full data without filtering help

start end
12 34
767 789