logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000003386_00952

You are here: Home > Sequence: MGYG000003386_00952

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pantoea brenneri
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Pantoea; Pantoea brenneri
CAZyme ID MGYG000003386_00952
CAZy Family GH1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
387 MGYG000003386_16|CGC3 44129.91 6.3177
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003386 4846469 MAG United States North America
Gene Location Start: 73530;  End: 74693  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003386_00952.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH1 51 346 1.8e-21 0.7785547785547785

CDD Domains      help

MGYG000003386_00952 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QTC49306.1 2.81e-278 1 386 1 386
AYP23732.1 2.81e-278 1 386 1 386
AZI50615.1 2.81e-278 1 386 1 386
QAV49024.1 2.81e-278 1 386 1 386
QAV44184.1 2.81e-278 1 386 1 386

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000064 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003386_00952.