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CAZyme Information: MGYG000003388_00343
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Neisseria subflava_C | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Burkholderiales; Neisseriaceae; Neisseria; Neisseria subflava_C | |||||||||||
| CAZyme ID | MGYG000003388_00343 | |||||||||||
| CAZy Family | GT104 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 134181; End: 135338 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT104 | 6 | 385 | 1.1e-153 | 0.9920844327176781 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4394 | EarP | 2.06e-161 | 9 | 383 | 3 | 370 | Elongation-Factor P (EF-P) rhamnosyltransferase EarP [Translation, ribosomal structure and biogenesis]. |
| pfam10093 | DUF2331 | 2.86e-143 | 11 | 378 | 3 | 372 | Uncharacterized protein conserved in bacteria (DUF2331). Members of this family of hypothetical bacterial proteins have no known function. |
| TIGR03837 | EarP | 5.16e-143 | 11 | 378 | 3 | 370 | Elongation-Factor P (EF-P) rhamnosyltransferase EarP. This model describes a conserved protein that typically is encoded next to the gene efp for translation elongation factor P. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QCL70938.1 | 1.71e-287 | 1 | 385 | 1 | 385 |
| QXW94711.1 | 7.49e-282 | 1 | 385 | 1 | 385 |
| QXW89998.1 | 7.49e-282 | 1 | 385 | 1 | 385 |
| QCL68867.1 | 2.51e-280 | 1 | 385 | 1 | 385 |
| QKI22178.1 | 4.85e-278 | 1 | 385 | 1 | 385 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5WXI_A | 1.95e-218 | 4 | 385 | 3 | 382 | EarPbound with dTDP-rhamnose (soaked) [Neisseria meningitidis H44/76],5WXI_B EarP bound with dTDP-rhamnose (soaked) [Neisseria meningitidis H44/76],5WXJ_A Apo EarP [Neisseria meningitidis H44/76],5WXJ_B Apo EarP [Neisseria meningitidis H44/76],5WXK_A EarP bound with domain I of EF-P [Neisseria meningitidis H44/76] |
| 5XVR_A | 1.21e-217 | 4 | 385 | 5 | 384 | EarPbound with dTDP-rhamnose (co-crystal) [Neisseria meningitidis H44/76],5XVR_B EarP bound with dTDP-rhamnose (co-crystal) [Neisseria meningitidis H44/76] |
| 7COX_A | 1.77e-214 | 4 | 385 | 3 | 382 | ChainA, Elongation factor P maturation arginine rhamnosyltransferase EarP [Neisseria meningitidis],7COX_F Chain F, Elongation factor P maturation arginine rhamnosyltransferase EarP [Neisseria meningitidis] |
| 6J7M_A | 1.32e-68 | 11 | 362 | 25 | 375 | Complexstructure of the Pseudomonas aeruginosa rhamnosyltransferase EarP with the acceptor elongation factor EF-P [Pseudomonas aeruginosa PAO1],6J7M_C Complex structure of the Pseudomonas aeruginosa rhamnosyltransferase EarP with the acceptor elongation factor EF-P [Pseudomonas aeruginosa PAO1] |
| 6J7L_A | 1.63e-68 | 11 | 362 | 25 | 375 | Crystalstructure of Pseudomonas aeruginosa Earp in complex with TDP [Pseudomonas aeruginosa PAO1] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| E6MVV9 | 1.07e-217 | 4 | 385 | 3 | 382 | Protein-arginine rhamnosyltransferase OS=Neisseria meningitidis serogroup B / serotype 15 (strain H44/76) OX=909420 GN=earP PE=1 SV=1 |
| A0A0T7AQA7 | 2.06e-208 | 4 | 385 | 3 | 382 | Protein-arginine rhamnosyltransferase OS=Neisseria meningitidis OX=487 GN=earP PE=1 SV=1 |
| Q9HZZ1 | 4.28e-68 | 11 | 362 | 6 | 356 | Protein-arginine rhamnosyltransferase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=earP PE=1 SV=1 |
| Q88LS1 | 6.83e-67 | 11 | 377 | 7 | 372 | Protein-arginine rhamnosyltransferase OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) OX=160488 GN=earP PE=1 SV=1 |
| Q8EEP8 | 2.86e-59 | 1 | 305 | 1 | 322 | Protein-arginine rhamnosyltransferase OS=Shewanella oneidensis (strain MR-1) OX=211586 GN=earP PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000052 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |