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CAZyme Information: MGYG000003390_01267
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Pseudescherichia vulneris | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Pseudescherichia; Pseudescherichia vulneris | |||||||||||
| CAZyme ID | MGYG000003390_01267 | |||||||||||
| CAZy Family | GH19 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 24264; End: 24893 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH19 | 17 | 175 | 5.2e-33 | 0.5194805194805194 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG3179 | COG3179 | 1.66e-65 | 1 | 208 | 4 | 205 | Predicted chitinase [General function prediction only]. |
| pfam00182 | Glyco_hydro_19 | 6.27e-08 | 17 | 169 | 33 | 156 | Chitinase class I. |
| cd00325 | chitinase_GH19 | 3.39e-07 | 40 | 189 | 50 | 189 | Glycoside hydrolase family 19, chitinase domain. Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Glycoside hydrolase family 19 chitinases are found primarily in plants (classes I, III, and IV), but some are found in bacteria. Class I and II chitinases are similar in their catalytic domains. Class I chitinases have an N-terminal cysteine-rich, chitin-binding domain which is separated from the catalytic domain by a proline and glycine-rich hinge region. Class II chitinases lack both the chitin-binding domain and the hinge region. Class IV chitinases are similar to class I chitinases, but they are smaller in size due to certain deletions. Despite lacking any significant sequence homology with lysozymes, structural analysis reveals that family 19 chitinases, together with family 46 chitosanases, are similar to several lysozymes including those from T4-phage and from goose. The structures reveal that the different enzyme groups arose from a common ancestor glycohydrolase antecedent to the prokaryotic/eukaryotic divergence. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| BCU56002.1 | 1.39e-118 | 1 | 208 | 1 | 208 |
| BCU55281.1 | 3.12e-115 | 1 | 208 | 1 | 208 |
| AFJ98838.1 | 1.59e-110 | 1 | 207 | 1 | 207 |
| ALB67898.1 | 2.63e-109 | 1 | 207 | 1 | 207 |
| ALB67495.1 | 1.07e-108 | 1 | 207 | 1 | 207 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4OK7_A | 1.85e-100 | 1 | 207 | 16 | 222 | ChainA, Endolysin [Salmonella phage SPN1S],4OK7_B Chain B, Endolysin [Salmonella phage SPN1S],4OK7_C Chain C, Endolysin [Salmonella phage SPN1S] |
| 3WH1_A | 2.27e-06 | 118 | 189 | 91 | 167 | CrystalStructure of a Family GH19 Chitinase from Bryum coronatum in complex with (GlcNAc)4 at 1.0 A resolution [Gemmabryum coronatum] |
| 4IJ4_A | 4.16e-06 | 118 | 189 | 90 | 166 | CrystalStructure of a Family GH19 chitinase from Bryum coronatum in complex with (GlcNAc)4 [Gemmabryum coronatum] |
| 7F88_A | 5.29e-06 | 120 | 189 | 84 | 158 | ChainA, Chitinase A [Gemmabryum coronatum],7F88_B Chain B, Chitinase A [Gemmabryum coronatum],7F88_C Chain C, Chitinase A [Gemmabryum coronatum] |
| 4TX7_A | 5.39e-06 | 118 | 169 | 110 | 162 | Crystalstructure of chitinase (GH19) from Vigna unguiculata [Vigna unguiculata subsp. sesquipedalis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P44187 | 7.75e-26 | 21 | 208 | 14 | 195 | Glycosyl hydrolase family 19 domain-containing protein HI_1415 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=HI_1415 PE=3 SV=1 |
| O64203 | 3.46e-08 | 8 | 203 | 187 | 357 | Endolysin A OS=Mycobacterium phage D29 OX=28369 GN=10 PE=1 SV=1 |
| P29021 | 1.47e-06 | 113 | 169 | 112 | 169 | Acidic endochitinase OS=Petunia hybrida OX=4102 PE=2 SV=1 |
| Q7XCK6 | 3.81e-06 | 121 | 169 | 128 | 177 | Chitinase 8 OS=Oryza sativa subsp. japonica OX=39947 GN=Cht8 PE=2 SV=1 |
| Q05540 | 8.85e-06 | 113 | 169 | 105 | 162 | Acidic 27 kDa endochitinase OS=Solanum lycopersicum OX=4081 GN=CHI17 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000013 | 0.000014 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |