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CAZyme Information: MGYG000003390_03852

You are here: Home > Sequence: MGYG000003390_03852

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pseudescherichia vulneris
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Pseudescherichia; Pseudescherichia vulneris
CAZyme ID MGYG000003390_03852
CAZy Family GH104
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
157 MGYG000003390_100|CGC1 17496.62 10.0675
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003390 4956281 MAG United States North America
Gene Location Start: 88266;  End: 88739  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 4.2.2.N1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH104 5 150 9.7e-58 0.9793103448275862

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd00736 lambda_lys-like 3.30e-72 7 152 1 141
Bacteriophage lambda lysozyme and similar proteins. Lysozyme from bacteriophage lambda hydrolyzes the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetylglucosamine (GlcNAc), as do other lysozymes. However, unlike other lysozymes, bacteriophage lambda does not produce a reducing end upon cleavage of the peptidoglycan, but rather uses the 6-OH of the same MurNAc residue to produce a 1,6-anhydromuramic acid terminal residue and is therefore a lytic transglycosylase. An identical 1,6-anhydro bond is formed in bacterial peptidoglycans by the action of the lytic transglycosylases of E. coli, though they differ structurally.
COG4678 COG4678 8.61e-59 8 155 29 179
Muramidase (phage lambda lysozyme) [Cell wall/membrane/envelope biogenesis, Mobilome: prophages, transposons].
pfam00959 Phage_lysozyme 4.01e-13 34 137 1 103
Phage lysozyme. This family includes lambda phage lysozyme and E. coli endolysin.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QHR72887.1 2.33e-90 2 157 3 159
AGZ17797.1 2.33e-90 2 157 3 159
QHR68038.1 9.49e-90 2 157 3 159
AZF88769.1 2.72e-89 2 157 3 159
QQV88599.1 3.61e-89 2 155 3 156

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1D9U_A 3.58e-62 5 154 4 153
ChainA, Bacteriophage Lambda Lysozyme [Lambdavirus lambda],1D9U_B Chain B, Bacteriophage Lambda Lysozyme [Lambdavirus lambda],3D3D_A Chain A, Lysozyme [Lambdavirus lambda],3D3D_B Chain B, Lysozyme [Lambdavirus lambda]
1AM7_A 1.10e-59 5 154 4 153
ChainA, LYSOZYME [Lambdavirus lambda],1AM7_B Chain B, LYSOZYME [Lambdavirus lambda],1AM7_C Chain C, LYSOZYME [Lambdavirus lambda]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P03706 2.23e-61 5 154 4 153
Endolysin OS=Escherichia phage lambda OX=10710 GN=R PE=1 SV=1
P51771 6.51e-43 11 155 12 165
Endolysin OS=Escherichia phage P2 OX=10679 GN=K PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000059 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003390_03852.