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CAZyme Information: MGYG000003392_00972
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Streptococcus mitis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus mitis | |||||||||||
| CAZyme ID | MGYG000003392_00972 | |||||||||||
| CAZy Family | GH73 | |||||||||||
| CAZyme Description | Putative endo-beta-N-acetylglucosaminidase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 1432; End: 3138 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4193 | LytD | 5.05e-60 | 400 | 568 | 58 | 236 | Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism]. |
| COG5263 | COG5263 | 8.29e-54 | 47 | 273 | 1 | 215 | Glucan-binding domain (YG repeat) [Carbohydrate transport and metabolism]. |
| smart00047 | LYZ2 | 1.93e-29 | 439 | 568 | 2 | 147 | Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes. |
| NF033930 | pneumo_PspA | 4.71e-22 | 53 | 288 | 471 | 659 | pneumococcal surface protein A. The pneumococcal surface protein proteins, found in Streptococcus pneumoniae, are repetitive, with patterns of localized high sequence identity across pairs of proteins given different specific names that recombination may be presumed. This protein, PspA, has an N-terminal region that lacks a cross-wall-targeting YSIRK type extended signal peptide, in contrast to the closely related choline-binding protein CbpA which has a similar C-terminus but a YSIRK-containing region at the N-terminus. |
| NF033838 | PspC_subgroup_1 | 7.78e-22 | 54 | 288 | 495 | 682 | pneumococcal surface protein PspC, choline-binding form. The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ACO37163.1 | 0.0 | 1 | 568 | 1 | 568 |
| CAI34848.1 | 0.0 | 1 | 568 | 1 | 568 |
| QBZ13382.1 | 0.0 | 1 | 568 | 1 | 568 |
| ALD68219.1 | 0.0 | 1 | 568 | 1 | 568 |
| CBJ22213.1 | 0.0 | 1 | 568 | 1 | 570 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4Q2W_A | 1.85e-185 | 290 | 568 | 12 | 290 | CrystalStructure of pneumococcal peptidoglycan hydrolase LytB [Streptococcus pneumoniae TIGR4] |
| 4PI7_A | 4.01e-19 | 413 | 567 | 51 | 218 | ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PI9_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PIA_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50] |
| 4PI8_A | 2.50e-18 | 413 | 567 | 51 | 218 | ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50] |
| 2WW5_A | 1.14e-13 | 28 | 191 | 42 | 224 | 3D-structureof the modular autolysin LytC from Streptococcus pneumoniae at 1.6 A resolution [Streptococcus pneumoniae R6],2WWD_A 3D-structure of the modular autolysin LytC from Streptococcus pneumoniae in complex with pneummococcal peptidoglycan fragment [Streptococcus pneumoniae R6] |
| 2WWC_A | 1.14e-13 | 28 | 191 | 42 | 224 | 3D-structureof the modular autolysin LytC from Streptococcus pneumoniae in complex with synthetic peptidoglycan ligand [Streptococcus pneumoniae R6] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P59205 | 9.35e-299 | 1 | 568 | 1 | 658 | Putative endo-beta-N-acetylglucosaminidase OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) OX=170187 GN=lytB PE=1 SV=1 |
| P59206 | 2.21e-291 | 1 | 568 | 1 | 702 | Putative endo-beta-N-acetylglucosaminidase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) OX=171101 GN=lytB PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000305 | 0.998839 | 0.000258 | 0.000198 | 0.000186 | 0.000182 |