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CAZyme Information: MGYG000003393_01672
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Pantoea ananatis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Pantoea; Pantoea ananatis | |||||||||||
| CAZyme ID | MGYG000003393_01672 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | Endo-polygalacturonase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 208599; End: 209786 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 62 | 371 | 1.6e-77 | 0.8676923076923077 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam00295 | Glyco_hydro_28 | 1.12e-59 | 106 | 343 | 42 | 274 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| COG5434 | Pgu1 | 1.31e-41 | 37 | 329 | 102 | 415 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| PLN02793 | PLN02793 | 5.24e-33 | 105 | 343 | 104 | 365 | Probable polygalacturonase |
| PLN02218 | PLN02218 | 2.02e-29 | 128 | 374 | 160 | 414 | polygalacturonase ADPG |
| PLN03010 | PLN03010 | 1.63e-26 | 109 | 376 | 130 | 385 | polygalacturonase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AMB75046.1 | 3.28e-291 | 1 | 395 | 23 | 417 |
| CCF10591.1 | 3.28e-291 | 1 | 395 | 23 | 417 |
| ADD76262.1 | 7.72e-290 | 1 | 395 | 23 | 417 |
| ASN16052.1 | 2.58e-288 | 1 | 395 | 23 | 417 |
| QTC45297.1 | 3.66e-288 | 1 | 395 | 23 | 417 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1BHE_A | 2.32e-114 | 9 | 374 | 2 | 366 | ChainA, POLYGALACTURONASE [Pectobacterium carotovorum] |
| 1NHC_A | 3.32e-14 | 134 | 342 | 78 | 288 | Structuralinsights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_B Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_C Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_D Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_E Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_F Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger] |
| 6KVE_A | 3.53e-14 | 128 | 360 | 80 | 310 | ChainA, Endo-polygalacturonase [Evansstolkia leycettana] |
| 6KVH_A | 4.75e-14 | 128 | 360 | 80 | 310 | ChainA, endo-polygalacturonase [Evansstolkia leycettana] |
| 7E56_A | 8.09e-14 | 128 | 360 | 72 | 302 | ChainA, Endo-polygalacturonase [Evansstolkia leycettana] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P18192 | 1.60e-115 | 2 | 374 | 21 | 392 | Endo-polygalacturonase OS=Pectobacterium carotovorum subsp. carotovorum OX=555 GN=peh PE=3 SV=1 |
| P26509 | 9.12e-115 | 2 | 374 | 21 | 392 | Endo-polygalacturonase OS=Pectobacterium parmentieri OX=1905730 GN=pehA PE=1 SV=1 |
| P20041 | 1.49e-74 | 2 | 367 | 25 | 452 | Polygalacturonase OS=Ralstonia solanacearum OX=305 GN=pglA PE=1 SV=1 |
| P58598 | 3.34e-73 | 2 | 367 | 27 | 454 | Polygalacturonase OS=Ralstonia solanacearum (strain GMI1000) OX=267608 GN=pglA PE=3 SV=1 |
| Q9FY19 | 6.10e-30 | 122 | 342 | 151 | 371 | Polygalacturonase OS=Juniperus ashei OX=13101 GN=JNA2 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000032 | 0.000007 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |