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CAZyme Information: MGYG000003393_03237

You are here: Home > Sequence: MGYG000003393_03237

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pantoea ananatis
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Pantoea; Pantoea ananatis
CAZyme ID MGYG000003393_03237
CAZy Family CBM13
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
391 42920.17 6.9738
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003393 4793768 MAG United States North America
Gene Location Start: 451015;  End: 452190  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003393_03237.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam05426 Alginate_lyase 8.92e-15 108 305 67 267
Alginate lyase. This family contains several bacterial alginate lyase proteins. Alginate is a family of 1-4-linked copolymers of beta -D-mannuronic acid (M) and alpha -L-guluronic acid (G). It is produced by brown algae and by some bacteria belonging to the genera Azotobacter and Pseudomonas. Alginate lyases catalyze the depolymerization of alginates by beta -elimination, generating a molecule containing 4-deoxy-L-erythro-hex-4-enepyranosyluronate at the nonreducing end. This family adopts an all alpha fold.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BAV06996.1 3.32e-114 27 389 19 383
QMW04693.1 2.20e-106 27 389 38 401
AHM66085.1 2.22e-100 2 389 1 400
AIY11542.1 2.22e-100 2 389 1 400
QPK60353.1 4.42e-100 19 389 27 400

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001122 0.597573 0.400319 0.000420 0.000297 0.000254

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003393_03237.