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CAZyme Information: MGYG000003395_04251

You are here: Home > Sequence: MGYG000003395_04251

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Superficieibacter sp900766525
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Superficieibacter; Superficieibacter sp900766525
CAZyme ID MGYG000003395_04251
CAZy Family CE8
CAZyme Description Putative acyl-CoA thioester hydrolase YbhC
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
426 MGYG000003395_93|CGC2 45698.99 6.1321
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003395 5080781 MAG United States North America
Gene Location Start: 52844;  End: 54124  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003395_04251.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 90 420 1.7e-54 0.875

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK10531 PRK10531 0.0 1 419 1 421
putative acyl-CoA thioester hydrolase.
COG4677 PemB 0.0 1 421 1 405
Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].
PLN02708 PLN02708 4.47e-15 69 306 216 413
Probable pectinesterase/pectinesterase inhibitor
pfam01095 Pectinesterase 1.23e-14 81 344 1 210
Pectinesterase.
PLN02773 PLN02773 1.06e-10 76 314 1 204
pectinesterase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BBV66945.1 1.71e-260 1 426 1 426
QIR28316.1 4.90e-260 1 426 1 426
BBT71959.1 1.40e-259 1 426 1 426
ASG63822.1 4.02e-259 1 426 1 426
BBQ84760.1 8.11e-259 1 426 1 426

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3GRH_A 1.39e-229 29 426 24 421
Crystalstructure of escherichia coli ybhc [Escherichia coli K-12]
4PMH_A 1.53e-63 34 419 2 366
Thestructure of rice weevil pectin methyl esterase [Sitophilus oryzae]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P46130 1.93e-244 1 426 1 426
Putative acyl-CoA thioester hydrolase YbhC OS=Escherichia coli (strain K12) OX=83333 GN=ybhC PE=1 SV=2
Q47474 2.23e-115 7 413 7 426
Pectinesterase B OS=Dickeya dadantii (strain 3937) OX=198628 GN=pemB PE=1 SV=2
P55743 6.07e-107 37 414 7 396
Pectinesterase B OS=Pectobacterium parmentieri OX=1905730 GN=pemB PE=3 SV=2
E7CIP7 1.29e-62 34 419 18 382
Pectinesterase OS=Sitophilus oryzae OX=7048 GN=CE8-1 PE=1 SV=1
P58601 1.31e-29 39 419 30 394
Pectinesterase OS=Ralstonia solanacearum (strain GMI1000) OX=267608 GN=pme PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000001 1.000044 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003395_04251.