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CAZyme Information: MGYG000003400_03776

You are here: Home > Sequence: MGYG000003400_03776

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Stenotrophomonas sp003028475
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas sp003028475
CAZyme ID MGYG000003400_03776
CAZy Family GH15
CAZyme Description Trehalase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
593 MGYG000003400_64|CGC1 67229.05 5.3832
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003400 4365701 MAG United States North America
Gene Location Start: 62327;  End: 64108  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003400_03776.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH15 220 582 3.8e-77 0.9916897506925207

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3387 SGA1 8.17e-81 7 586 18 605
Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family [Carbohydrate transport and metabolism].
pfam00723 Glyco_hydro_15 3.14e-40 221 582 5 416
Glycosyl hydrolases family 15. In higher organisms this family is represented by phosphorylase kinase subunits.
TIGR01577 oligosac_amyl 2.68e-14 199 575 226 603
oligosaccharide amylase. The name of this type of amylase is based on the characterization of an glucoamylase family enzyme from Thermoactinomyces vulgaris. The T. vulgaris enzyme was expressed in E. coli and, like other glucoamylases, it releases beta-D-glucose from starch. However, unlike previously characterized glucoamylases, this T. vulgaris amylase hydrolyzes maltooligosaccharides (maltotetraose, maltose) more efficiently than starch (1), indicating this enzyme belongs to a class of glucoamylase-type enzymes with oligosaccharide-metabolizing activity.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QHE22251.1 0.0 1 593 1 593
VEE54562.1 0.0 1 593 1 593
QGL94150.1 0.0 1 593 1 593
ALA88648.1 0.0 1 593 1 593
ALA92604.1 0.0 1 593 1 593

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q978S7 1.25e-83 9 588 34 613
Trehalase OS=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) OX=273116 GN=TVG1381191 PE=1 SV=1
P71741 7.32e-79 4 592 53 667
Trehalase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=Rv2402 PE=1 SV=2
A0R0W9 3.01e-78 4 592 41 655
Trehalase OS=Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) OX=246196 GN=MSMEG_4535 PE=1 SV=1
Q9HLE2 3.49e-76 19 589 2 572
Trehalase OS=Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) OX=273075 GN=Ta0286 PE=1 SV=1
Q10211 9.15e-70 9 588 23 642
Uncharacterized protein C4H3.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC4H3.03c PE=4 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000042 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003400_03776.