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CAZyme Information: MGYG000003401_01091

You are here: Home > Sequence: MGYG000003401_01091

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Staphylococcus capitis
Lineage Bacteria; Firmicutes; Bacilli; Staphylococcales; Staphylococcaceae; Staphylococcus; Staphylococcus capitis
CAZyme ID MGYG000003401_01091
CAZy Family GT2
CAZyme Description D-alanine--poly(phosphoribitol) ligase subunit 1
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1707 MGYG000003401_25|CGC2 194533.91 4.6871
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003401 2394594 MAG United States North America
Gene Location Start: 54588;  End: 59711  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003401_01091.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK05691 PRK05691 0.0 13 1316 1409 2774
peptide synthase; Validated
PRK12316 PRK12316 0.0 293 1343 16 1110
peptide synthase; Provisional
PRK12316 PRK12316 0.0 19 1320 2290 3625
peptide synthase; Provisional
PRK12467 PRK12467 0.0 291 1330 14 1110
peptide synthase; Provisional
PRK05691 PRK05691 0.0 47 1316 374 1704
peptide synthase; Validated

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QND46664.1 8.34e-210 4 1318 1282 2663
BAY30132.1 5.13e-153 232 1320 2143 3298
BAZ00088.1 1.00e-150 232 1320 2141 3296
BAZ75991.1 1.00e-150 232 1320 2141 3296
BAY90071.1 1.87e-149 232 1320 2132 3287

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6MFZ_A 2.81e-206 18 1325 478 1805
Crystalstructure of dimodular LgrA in a condensation state [Brevibacillus parabrevis],6MFZ_B Crystal structure of dimodular LgrA in a condensation state [Brevibacillus parabrevis]
6MFY_A 8.24e-192 18 1238 478 1715
Crystalstructure of a 5-domain construct of LgrA in the substrate donation state [Brevibacillus parabrevis],6MG0_A Crystal structure of a 5-domain construct of LgrA in the thiolation state [Brevibacillus parabrevis],6MG0_B Crystal structure of a 5-domain construct of LgrA in the thiolation state [Brevibacillus parabrevis]
4F6L_A 2.05e-133 1245 1703 39 498
ChainA, AusA reductase domain protein [Staphylococcus aureus subsp. aureus Mu50],4F6L_B Chain B, AusA reductase domain protein [Staphylococcus aureus subsp. aureus Mu50]
2VSQ_A 3.04e-125 316 1320 6 1042
Structureof surfactin A synthetase C (SrfA-C), a nonribosomal peptide synthetase termination module [Bacillus subtilis]
4ZXH_A 9.20e-120 325 1323 19 1050
ChainA, ABBFA_003403 [Acinetobacter baumannii AB307-0294],4ZXI_A Chain A, Tyrocidine synthetase 3 [Acinetobacter baumannii AB307-0294]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O68008 3.51e-273 18 1315 740 2061
Bacitracin synthase 3 OS=Bacillus licheniformis OX=1402 GN=bacC PE=3 SV=1
P0C064 5.78e-264 2 1318 1771 3123
Gramicidin S synthase 2 OS=Brevibacillus brevis OX=1393 GN=grsB PE=1 SV=2
O30409 1.22e-262 2 1318 3840 5191
Tyrocidine synthase 3 OS=Brevibacillus parabrevis OX=54914 GN=tycC PE=1 SV=1
P0C063 2.16e-260 2 1318 1771 3124
Gramicidin S synthase 2 OS=Aneurinibacillus migulanus OX=47500 GN=grsB PE=3 SV=2
O30408 2.62e-260 2 1314 1773 3107
Tyrocidine synthase 2 OS=Brevibacillus parabrevis OX=54914 GN=tycB PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999880 0.000138 0.000027 0.000001 0.000000 0.000004

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003401_01091.