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CAZyme Information: MGYG000003401_01942
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Staphylococcus capitis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Staphylococcales; Staphylococcaceae; Staphylococcus; Staphylococcus capitis | |||||||||||
| CAZyme ID | MGYG000003401_01942 | |||||||||||
| CAZy Family | CBM50 | |||||||||||
| CAZyme Description | N-acetylmuramoyl-L-alanine amidase sle1 | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 71547; End: 72356 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG3942 | COG3942 | 3.27e-44 | 154 | 269 | 57 | 171 | Surface antigen [Cell wall/membrane/envelope biogenesis]. |
| PRK08581 | PRK08581 | 1.26e-25 | 150 | 268 | 492 | 616 | amidase domain-containing protein. |
| pfam05257 | CHAP | 5.96e-19 | 163 | 244 | 3 | 83 | CHAP domain. This domain corresponds to an amidase function. Many of these proteins are involved in cell wall metabolism of bacteria. This domain is found at the N-terminus of Escherichia coli gss, where it functions as a glutathionylspermidine amidase EC:3.5.1.78. This domain is found to be the catalytic domain of PlyCA. CHAP is the amidase domain of bifunctional Escherichia coli glutathionylspermidine synthetase/amidase, and it catalyzes the hydrolysis of Gsp (glutathionylspermidine) into glutathione and spermidine. |
| pfam01476 | LysM | 5.78e-14 | 92 | 134 | 1 | 43 | LysM domain. The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. The structure of this domain is known. |
| PRK06347 | PRK06347 | 3.60e-13 | 29 | 160 | 333 | 474 | 1,4-beta-N-acetylmuramoylhydrolase. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| BAW91529.1 | 1.19e-190 | 1 | 269 | 1 | 269 |
| AKL91183.1 | 1.19e-190 | 1 | 269 | 1 | 269 |
| QOX61412.1 | 1.19e-190 | 1 | 269 | 1 | 269 |
| ATN03430.1 | 6.89e-190 | 1 | 269 | 1 | 269 |
| QKH91721.1 | 2.21e-186 | 1 | 269 | 1 | 269 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2K3A_A | 1.23e-39 | 137 | 269 | 24 | 153 | ChainA, CHAP domain protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 = NCTC 7292] |
| 2LRJ_A | 2.18e-38 | 158 | 269 | 3 | 112 | ChainA, Staphyloxanthin biosynthesis protein, putative [Staphylococcus aureus subsp. aureus COL] |
| 5T1Q_A | 2.06e-15 | 165 | 268 | 248 | 356 | ChainA, N-acetylmuramoyl-L-alanine amidase domain-containing protein SAOUHSC_02979 [Staphylococcus aureus subsp. aureus NCTC 8325],5T1Q_B Chain B, N-acetylmuramoyl-L-alanine amidase domain-containing protein SAOUHSC_02979 [Staphylococcus aureus subsp. aureus NCTC 8325],5T1Q_C Chain C, N-acetylmuramoyl-L-alanine amidase domain-containing protein SAOUHSC_02979 [Staphylococcus aureus subsp. aureus NCTC 8325],5T1Q_D Chain D, N-acetylmuramoyl-L-alanine amidase domain-containing protein SAOUHSC_02979 [Staphylococcus aureus subsp. aureus NCTC 8325] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q2G0D4 | 1.23e-144 | 1 | 269 | 1 | 265 | Probable autolysin SsaALP OS=Staphylococcus aureus (strain NCTC 8325 / PS 47) OX=93061 GN=SAOUHSC_00671 PE=1 SV=1 |
| Q5HRU2 | 1.49e-76 | 27 | 269 | 84 | 324 | N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=sle1 PE=3 SV=1 |
| Q8CMN2 | 1.49e-76 | 27 | 269 | 84 | 324 | N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=sle1 PE=3 SV=1 |
| Q2YVT4 | 1.89e-74 | 29 | 269 | 93 | 335 | N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) OX=273036 GN=sle1 PE=3 SV=1 |
| Q7A7E0 | 3.67e-74 | 29 | 269 | 93 | 334 | N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus aureus (strain N315) OX=158879 GN=sle1 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000499 | 0.998705 | 0.000196 | 0.000226 | 0.000191 | 0.000164 |