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CAZyme Information: MGYG000003403_01421
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Stenotrophomonas maltophilia_AM | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia_AM | |||||||||||
| CAZyme ID | MGYG000003403_01421 | |||||||||||
| CAZy Family | GT19 | |||||||||||
| CAZyme Description | Lipid-A-disaccharide synthase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 261256; End: 262515 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT19 | 37 | 397 | 2.2e-133 | 0.9943502824858758 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK00025 | lpxB | 0.0 | 34 | 415 | 1 | 378 | lipid-A-disaccharide synthase; Reviewed |
| COG0763 | LpxB | 1.07e-177 | 34 | 412 | 1 | 379 | Lipid A disaccharide synthetase [Cell wall/membrane/envelope biogenesis]. |
| pfam02684 | LpxB | 1.87e-131 | 37 | 408 | 1 | 374 | Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide. |
| TIGR00215 | lpxB | 1.52e-120 | 37 | 411 | 8 | 385 | lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides] |
| PRK01021 | lpxB | 4.59e-51 | 39 | 372 | 231 | 566 | lipid-A-disaccharide synthase; Reviewed |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QPX93099.1 | 4.70e-300 | 1 | 419 | 1 | 419 |
| VEE52379.1 | 7.78e-299 | 1 | 419 | 1 | 419 |
| ALA85937.1 | 9.08e-298 | 1 | 419 | 1 | 419 |
| ALA89893.1 | 9.08e-298 | 1 | 419 | 1 | 419 |
| QGM00507.1 | 7.14e-295 | 1 | 419 | 1 | 419 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5W8N_A | 2.83e-115 | 32 | 411 | 4 | 380 | LipidA Disaccharide Synthase (LpxB)-6 solubilizing mutations [Escherichia coli BL21(DE3)] |
| 5W8S_A | 2.83e-115 | 32 | 411 | 4 | 380 | LipidA Disaccharide Synthase (LpxB)-7 solubilizing mutations [Escherichia coli BL21(DE3)],5W8X_A Lipid A Disaccharide Synthase (LpxB)-7 solubilizing mutations-Bound to UDP [Escherichia coli BL21(DE3)] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q8PAW6 | 1.14e-211 | 33 | 416 | 42 | 425 | Lipid-A-disaccharide synthase OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) OX=190485 GN=lpxB PE=3 SV=2 |
| Q4USP7 | 1.14e-211 | 33 | 416 | 42 | 425 | Lipid-A-disaccharide synthase OS=Xanthomonas campestris pv. campestris (strain 8004) OX=314565 GN=lpxB PE=3 SV=2 |
| Q8PML8 | 1.94e-210 | 32 | 416 | 42 | 426 | Lipid-A-disaccharide synthase OS=Xanthomonas axonopodis pv. citri (strain 306) OX=190486 GN=lpxB PE=3 SV=2 |
| Q3BVL7 | 3.91e-210 | 33 | 412 | 43 | 422 | Lipid-A-disaccharide synthase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) OX=316273 GN=lpxB PE=3 SV=1 |
| Q2P4B8 | 1.28e-204 | 33 | 412 | 43 | 422 | Lipid-A-disaccharide synthase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) OX=342109 GN=lpxB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000030 | 0.000021 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |