logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000003419_01649

You are here: Home > Sequence: MGYG000003419_01649

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species RF16 sp900766775
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Paludibacteraceae; RF16; RF16 sp900766775
CAZyme ID MGYG000003419_01649
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
605 MGYG000003419_228|CGC1 66107.32 4.6349
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003419 2335712 MAG Fiji Oceania
Gene Location Start: 680;  End: 2497  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003419_01649.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 88 279 7.6e-61 0.9398907103825137

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
smart00656 Amb_all 4.53e-06 102 229 17 151
Amb_all domain.
COG3866 PelB 2.73e-04 4 391 7 329
Pectate lyase [Carbohydrate transport and metabolism].
pfam18884 TSP3_bac 0.001 495 516 1 22
Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT75604.1 1.50e-142 22 539 32 534
ALJ01754.1 2.14e-88 27 538 18 461
QEG34169.1 5.50e-85 27 537 27 466
QDV25199.1 1.61e-84 25 537 25 456
QNA45667.1 1.91e-84 27 535 23 457

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q0CLG7 4.21e-37 22 541 16 417
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1
Q5B297 1.88e-35 22 546 16 419
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1
A1DPF0 2.23e-34 10 537 3 414
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
B0XMA2 3.04e-34 10 537 3 414
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q4WL88 4.15e-34 14 537 7 414
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000326 0.998990 0.000171 0.000173 0.000153 0.000141

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003419_01649.