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CAZyme Information: MGYG000003423_00805

You are here: Home > Sequence: MGYG000003423_00805

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species W3P20-009 sp900766825
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; W3P20-009; W3P20-009; W3P20-009 sp900766825
CAZyme ID MGYG000003423_00805
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
476 51382.83 6.4809
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003423 2824109 MAG Fiji Oceania
Gene Location Start: 50637;  End: 52067  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003423_00805.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 163 352 3.9e-40 0.8861386138613861

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
smart00656 Amb_all 3.37e-29 194 350 28 186
Amb_all domain.
COG3866 PelB 2.47e-24 29 410 14 342
Pectate lyase [Carbohydrate transport and metabolism].
pfam00544 Pec_lyase_C 8.86e-12 198 350 52 211
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AAW84045.1 9.44e-167 86 476 1 389
ADE83376.1 9.32e-119 15 411 14 421
QVJ81552.1 1.87e-118 15 411 14 421
AZA53390.1 1.38e-45 142 411 83 362
QXU49699.1 1.38e-45 10 411 1 362

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1VBL_A 4.72e-16 186 377 136 340
Structureof the thermostable pectate lyase PL 47 [Bacillus sp. TS-47]
3ZSC_A 2.19e-14 202 327 87 214
Catalyticfunction and substrate recognition of the pectate lyase from Thermotoga maritima [Thermotoga maritima]
1PXZ_A 4.46e-09 201 344 127 262
ChainA, Major pollen allergen Jun a 1 [Juniperus ashei],1PXZ_B Chain B, Major pollen allergen Jun a 1 [Juniperus ashei]
1PCL_A 4.45e-07 158 408 59 351
ChainA, PECTATE LYASE E [Dickeya chrysanthemi]
4HWV_A 5.65e-06 207 337 194 364
Structureof Pectate Lyase from Acidovorax avenae subsp citrulli [Acidovorax citrulli AAC00-1],4HWV_B Structure of Pectate Lyase from Acidovorax avenae subsp citrulli [Acidovorax citrulli AAC00-1]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B1L969 4.88e-18 202 327 112 239
Pectate trisaccharide-lyase OS=Thermotoga sp. (strain RQ2) OX=126740 GN=pelA PE=3 SV=1
Q9WYR4 1.21e-17 202 327 114 241
Pectate trisaccharide-lyase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=pelA PE=1 SV=1
Q9C5M8 2.45e-10 227 354 208 336
Probable pectate lyase 18 OS=Arabidopsis thaliana OX=3702 GN=At4g24780 PE=2 SV=2
Q93WF1 2.53e-10 227 354 217 345
Probable pectate lyase 20 OS=Arabidopsis thaliana OX=3702 GN=At5g48900 PE=2 SV=1
Q9M8Z8 1.39e-09 227 354 216 344
Probable pectate lyase 8 OS=Arabidopsis thaliana OX=3702 GN=At3g07010 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000500 0.998605 0.000209 0.000279 0.000188 0.000178

TMHMM  Annotations      download full data without filtering help

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