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CAZyme Information: MGYG000003427_00963

You are here: Home > Sequence: MGYG000003427_00963

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species HGM12587 sp900766915
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; HGM12587; HGM12587 sp900766915
CAZyme ID MGYG000003427_00963
CAZy Family GH24
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
284 MGYG000003427_127|CGC1 32049.68 10.0474
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003427 3377258 MAG Fiji Oceania
Gene Location Start: 14721;  End: 15575  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003427_00963.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH24 4 129 1.6e-42 0.9854014598540146

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd00737 lyz_endolysin_autolysin 5.19e-66 7 134 1 136
endolysin and autolysin. The dsDNA phages of eubacteria use endolysins or muralytic enzymes in conjunction with hollin, a small membrane protein, to degrade the peptidoglycan found in bacterial cell walls. Similarly, bacteria produce autolysins to facilitate the biosynthesis of its cell wall heteropolymer peptidoglycan and cell division. Endolysins and autolysins are found in viruses and bacteria, respectively. Both endolysin and autolysin enzymes cleave the glycosidic beta 1,4-bonds between the N-acetylmuramic acid and the N-acetylglucosamine of the peptidoglycan.
cd16901 lyz_P1 7.59e-42 3 132 2 138
P1 lysozyme Lyz-like proteins. Enterobacteria phage P1 lysozyme Lyz is secreted to the Escherichia coli periplasm where it is membrane bound and inactive. Activation involves the release from the membrane, an intramolecular thiol-disulfide isomerization and extensive structural rearrangement of the N-terminal region. The dsDNA phages of eubacteria use endolysins or muralytic enzymes in conjunction with hollin, a small membrane protein, to degrade the peptidoglycan found in bacterial cell walls. Similarly, bacteria produce autolysins to facilitate the biosynthesis of its cell wall heteropolymer peptidoglycan and cell division. Endolysins and autolysins are found in viruses and bacteria, respectively. Both endolysin and autolysin enzymes cleave the glycosidic beta 1,4-bonds between the N-acetylmuramic acid and the N-acetylglucosamine of the peptidoglycan.
COG3772 RrrD 2.02e-39 1 137 5 151
Phage-related lysozyme (muramidase), GH24 family [Cell wall/membrane/envelope biogenesis].
cd16900 endolysin_R21-like 2.83e-31 10 134 11 142
endolysin R21-like proteins. Unlike T4 E phage lysozyme, the endolysin R21 from Enterobacteria phage P21 has an N-terminal SAR (signal-arrest-release) domain that anchors the endolysin to the membrane in an inactive form, which act to prevent premature lysis of the infected bacterium. The dsDNA phages of eubacteria use endolysins or muralytic enzymes in conjunction with hollin, a small membrane protein, to degrade the peptidoglycan found in bacterial cell walls. Similarly, bacteria produce autolysins to facilitate the biosynthesis of its cell wall heteropolymer peptidoglycan and cell division. Endolysins and autolysins are found in viruses and bacteria, respectively. Both endolysin and autolysin enzymes cleave the glycosidic beta 1,4-bonds between the N-acetylmuramic acid and the N-acetylglucosamine of the peptidoglycan.
pfam08291 Peptidase_M15_3 1.46e-23 158 261 1 112
Peptidase M15.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
VCV22350.1 1.34e-41 7 135 10 143
VUE37339.1 1.34e-41 7 135 10 143
QKS48534.1 3.51e-38 2 140 4 145
QKS43439.1 6.96e-38 2 147 4 152
QMT07486.1 2.42e-36 1 134 1 145

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6ET6_A 1.83e-29 3 135 52 195
ChainA, Lysozyme [Acinetobacter baumannii]
2ANV_A 3.10e-19 1 134 2 145
ChainA, Lysozyme [Lederbergvirus P22],2ANV_B Chain B, Lysozyme [Lederbergvirus P22],2ANX_A Chain A, Lysozyme [Lederbergvirus P22],2ANX_B Chain B, Lysozyme [Lederbergvirus P22]
6H9D_A 9.02e-19 2 134 5 147
ChainA, Lysozyme [Asticcacaulis excentricus],6H9D_B Chain B, Lysozyme [Asticcacaulis excentricus],6H9D_C Chain C, Lysozyme [Asticcacaulis excentricus]
7M5I_A 1.16e-15 1 134 7 154
ChainA, Endolysin [Escherichia coli O157 typing phage 15],7M5I_B Chain B, Endolysin [Escherichia coli O157 typing phage 15]
1XJU_A 2.19e-13 2 134 1 151
ChainA, Lysozyme [Punavirus P1],1XJU_B Chain B, Lysozyme [Punavirus P1]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P62692 1.34e-23 1 135 1 138
Endolysin OS=Lactococcus phage c2 OX=31537 GN=L3 PE=3 SV=1
P62693 1.34e-23 1 135 1 138
Endolysin OS=Lactococcus phage phivML3 OX=10746 GN=L3 PE=3 SV=1
Q37896 1.05e-20 1 145 1 154
Endolysin OS=Bacillus phage B103 OX=10778 GN=15 PE=3 SV=1
Q9T1T5 1.15e-20 1 136 1 146
Endolysin OS=Acyrthosiphon pisum secondary endosymbiont phage 1 OX=2682836 GN=13 PE=3 SV=1
P09963 8.74e-19 1 134 2 145
Endolysin OS=Salmonella phage P22 OX=10754 GN=19 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000083 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003427_00963.