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CAZyme Information: MGYG000003430_00819

You are here: Home > Sequence: MGYG000003430_00819

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Eubacterium_R sp900766895
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; Eubacterium_R; Eubacterium_R sp900766895
CAZyme ID MGYG000003430_00819
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
514 MGYG000003430_74|CGC1 57193.43 6.2456
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003430 1567717 MAG Fiji Oceania
Gene Location Start: 9200;  End: 10744  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003430_00819.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 84 449 2.1e-49 0.9107692307692308

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 1.17e-42 47 466 72 497
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 7.97e-12 197 363 87 246
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN03003 PLN03003 1.68e-10 190 386 133 321
Probable polygalacturonase At3g15720
PLN02218 PLN02218 7.18e-10 30 383 29 371
polygalacturonase ADPG
PLN02188 PLN02188 2.97e-07 58 363 37 316
polygalacturonase/glycoside hydrolase family protein

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AOZ96985.1 2.20e-83 31 487 12 508
QGK73231.1 9.97e-40 52 513 18 460
QDW21015.1 3.57e-39 52 513 18 460
AOC96522.1 3.57e-39 52 513 18 460
ADY37829.1 2.54e-38 59 513 26 471

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q02096 2.16e-07 60 363 87 365
Polygalacturonase OS=Persea americana OX=3435 PE=2 SV=1
P18192 1.36e-06 244 363 226 336
Endo-polygalacturonase OS=Pectobacterium carotovorum subsp. carotovorum OX=555 GN=peh PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000068 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003430_00819.