CAZyme Information: MGYG000003430_00935

Basic Information

• Species: Eubacterium_R sp900766895
• Lineage: Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; Eubacterium_R; Eubacterium_R sp900766895
• CAZyme ID: MGYG000003430_00935
• CAZy Family: GH127
• CAZyme Description: Non-reducing end beta-L-arabinofuranosidase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
669		76685.47	5.189

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003430	1567717	MAG	Fiji	Oceania

• Gene Location: Start: 3157; End: 5166 Strand: +

Full Sequence      

MSSEQNVNKPRQNVEQARGMYYNIIGDYMDTKQYSNQVKLKNIRINDTFWSKIQSKISQS
VIPYQYEALNDRIENAEKSYCIENFKKASRALEARKNGEITPVYPTDKWHYDDNNANENA
FHGWVFQDSDAYKWLEAVAYSLTNKWDDTLYKNACEVIELICSAQEQNGYLDTLYTINNP
KNIFTNLHDYHELYCFGHLAEAGVAFYEATVNRRLLDCAMHFADLICSTFNGNAKRGYPG
HEIAEMALIKLYEISGKRQYLDTAEFFINERGTKPYYFDLEQGINTDGNGYVYNQAHLPV
KEQKEAVGHAVRGVYLYSGMADTARLLKDDELYSACLKIWQSITQKKMYITGGIGSTVDG
EAFSFDYDLPNDLAYCETCASIGLIFFGMRMLKISPSSQIGDTIERALYNTVLAGMNEDG
DRFFYVNPLEVLPMASKCDSRKHHVKPERQKWFGCACCPPNLARLLSSIGEYCITENNDV
IYIHQYIGGEYLANNATVVVNSSYTENGQVSITISPKKETTVALRIPAWCKDYSFDKKAK
IENGYAYFEVSGETVINICFNMSVRLVGCSNLVRENVGRLSVCRGPFVYCVEEIDNGPNL
QMLRIDTNTQPIYDKENGIIKARGFRQRQNDELYFDFAKLTEDEQEIILIPYCKWGNRGE
NEMNVYIRY

Enzyme Prediction     

No EC number prediction in MGYG000003430_00935.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH127	44	590	3e-184	0.9961832061068703

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG3533	COG3533	1.66e-160	39	668	8	586	Uncharacterized conserved protein, DUF1680 family [Function unknown].
pfam07944	Glyco_hydro_127	1.70e-133	42	590	1	503	Beta-L-arabinofuranosidase, GH127. One member of this family, from Bidobacterium longicum, UniProtKB:E8MGH8, has been characterized as an unusual beta-L-arabinofuranosidase enzyme, EC:3.2.1.185. It rleases l-arabinose from the l-arabinofuranose (Araf)-beta1,2-Araf disaccharide and also transglycosylates 1-alkanols with retention of the anomeric configuration. Terminal beta-l-arabinofuranosyl residues have been found in arabinogalactan proteins from a mumber of different plantt species. beta-l-Arabinofuranosyl linkages with 1-4 arabinofuranosides are also found in the sugar chains of extensin and solanaceous lectins, hydroxyproline (Hyp)2-rich glycoproteins that are widely observed in plant cell wall fractions. The critical residue for catalytic activity is Glu-338, in a ET/SCAS sequence context.
pfam07221	GlcNAc_2-epim	2.07e-05	198	313	144	288	N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase). This family contains a number of eukaryotic and bacterial N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) enzymes (EC:5.3.1.8) approximately 500 residues long. This converts N-acyl-D-glucosamine to N-acyl-D-mannosamine.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ANU78348.2	9.33e-215	29	668	1	681
QQQ91696.1	9.33e-215	29	668	1	681
ASU31156.1	9.33e-215	29	668	1	681
QJU15845.1	1.32e-214	29	668	1	681
QIB58606.1	1.84e-210	29	668	1	675

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4QJY_A	4.21e-181	42	667	15	645	Crystalstructure of native Ara127N, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QJY_B Crystal structure of native Ara127N, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus]
4QK0_A	2.50e-174	42	667	15	645	Crystalstructure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_B Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_C Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_D Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus]
3WRE_A	1.22e-120	42	668	2	657	Thecrystal structure of native HypBA1 from Bifidobacterium longum JCM 1217 [Bifidobacterium longum subsp. longum JCM 1217],3WRG_A The complex structure of HypBA1 with L-arabinose [Bifidobacterium longum subsp. longum JCM 1217]
3WKW_A	1.65e-120	42	668	2	657	Crystalstructure of GH127 beta-L-arabinofuranosidase HypBA1 from Bifidobacterium longum ligand free form [Bifidobacterium longum subsp. longum JCM 1217],3WKX_A Crystal structure of GH127 beta-L-arabinofuranosidase HypBA1 from Bifidobacterium longum arabinose complex form [Bifidobacterium longum subsp. longum JCM 1217],7BZL_A Chain A, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217],7DIF_A Chain A, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217],7EXV_A Chain A, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217],7EXW_A Chain A, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217]
7EXU_A	4.59e-120	42	668	2	657	ChainA, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
E8MGH8	6.65e-120	42	668	2	657	Non-reducing end beta-L-arabinofuranosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA1 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000006	0.000002	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000003430_00935.