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CAZyme Information: MGYG000003433_01188

You are here: Home > Sequence: MGYG000003433_01188

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-485 sp900766975
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; CAG-485; CAG-485 sp900766975
CAZyme ID MGYG000003433_01188
CAZy Family GT9
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
350 MGYG000003433_45|CGC1 39573.66 8.6896
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003433 2173228 MAG Fiji Oceania
Gene Location Start: 17655;  End: 18707  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003433_01188.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT9 85 329 2.2e-34 0.9244444444444444

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd03789 GT9_LPS_heptosyltransferase 4.50e-34 10 349 2 277
lipopolysaccharide heptosyltransferase and similar proteins. Lipopolysaccharide heptosyltransferase (2.4.99.B6) is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family also contains lipopolysaccharide 1,2-N-acetylglucosaminetransferase EC 2.4.1.56 and belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
COG0859 RfaF 9.73e-32 10 350 4 329
ADP-heptose:LPS heptosyltransferase [Cell wall/membrane/envelope biogenesis].
pfam01075 Glyco_transf_9 1.77e-18 76 333 2 247
Glycosyltransferase family 9 (heptosyltransferase). Members of this family belong to glycosyltransferase family 9. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. All of these enzymes transfer heptose to the lipopolysaccharide core.
PRK10422 PRK10422 3.17e-05 188 312 185 306
lipopolysaccharide core biosynthesis protein; Provisional
PRK10916 PRK10916 1.34e-04 218 295 212 292
ADP-heptose--LPS heptosyltransferase RfaF.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QCD37124.1 4.20e-109 8 350 3 345
QQR08225.1 3.79e-102 8 350 10 351
ANU64408.1 3.79e-102 8 350 10 351
ASB37493.1 3.79e-102 8 350 10 351
QUT74155.1 6.17e-91 10 350 4 342

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.938202 0.061237 0.000241 0.000126 0.000075 0.000143

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003433_01188.