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CAZyme Information: MGYG000003434_01297

You are here: Home > Sequence: MGYG000003434_01297

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; CAG-279;
CAZyme ID MGYG000003434_01297
CAZy Family GH23
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
833 92615.81 10.0428
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003434 1762272 MAG Fiji Oceania
Gene Location Start: 1398;  End: 3899  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003434_01297.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH23 117 252 1.4e-25 0.8740740740740741

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd16894 MltD-like 1.39e-69 125 254 1 129
Membrane-bound lytic murein transglycosylase D and similar proteins. Lytic transglycosylases (LT) catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc). Membrane-bound lytic murein transglycosylase D protein (MltD) family members may have one or more small LysM domains, which may contribute to peptidoglycan binding. Unlike the similar "goose-type" lysozymes, LTs also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, as well as the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL).
PRK10783 mltD 7.44e-52 117 578 104 444
membrane-bound lytic murein transglycosylase D; Provisional
PRK06347 PRK06347 5.86e-38 589 830 319 591
1,4-beta-N-acetylmuramoylhydrolase.
PRK06347 PRK06347 2.21e-36 468 707 327 591
1,4-beta-N-acetylmuramoylhydrolase.
pfam01464 SLT 5.98e-33 120 230 1 112
Transglycosylase SLT domain. This family is distantly related to pfam00062. Members are found in phages, type II, type III and type IV secretion systems.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCI63615.1 1.26e-177 20 646 25 648
QQR10036.1 2.88e-173 4 515 8 545
ANU62627.1 2.88e-173 4 515 8 545
QIM10870.1 1.45e-149 17 522 25 543
AHF12926.1 1.72e-144 42 515 2 442

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1QSA_A 1.92e-08 141 259 478 601
CrystalStructure Of The 70 Kda Soluble Lytic Transglycosylase Slt70 From Escherichia Coli At 1.65 Angstroms Resolution [Escherichia coli],1QTE_A Crystal Structure Of The 70 Kda Soluble Lytic Transglycosylase Slt70 From Escherichia Coli At 1.90 A Resolution In Complex With A 1,6- Anhydromurotripeptide [Escherichia coli]
2MKX_A 2.32e-08 724 767 5 48
Solutionstructure of LysM the peptidoglycan binding domain of autolysin AtlA from Enterococcus faecalis [Enterococcus faecalis V583]
1SLY_A 3.00e-07 141 259 478 601
ComplexOf The 70-Kda Soluble Lytic Transglycosylase With Bulgecin A [Escherichia coli]
6FBT_A 4.64e-06 141 246 474 582
ChainA, Lytic murein transglycosylase [Pseudomonas aeruginosa]
5OHU_A 4.75e-06 141 246 503 611
TheX-ray Structure of Lytic Transglycosylase Slt from Pseudomonas aeruginosa [Pseudomonas aeruginosa]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P37710 3.69e-51 473 830 362 736
Autolysin OS=Enterococcus faecalis (strain ATCC 700802 / V583) OX=226185 GN=EF_0799 PE=1 SV=2
P0AEZ8 2.68e-37 86 505 71 433
Membrane-bound lytic murein transglycosylase D OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=mltD PE=3 SV=1
P0AEZ7 2.68e-37 86 505 71 433
Membrane-bound lytic murein transglycosylase D OS=Escherichia coli (strain K12) OX=83333 GN=mltD PE=1 SV=1
O07532 1.75e-35 475 774 30 357
Peptidoglycan endopeptidase LytF OS=Bacillus subtilis (strain 168) OX=224308 GN=lytF PE=1 SV=2
P39046 1.20e-34 474 828 257 662
Muramidase-2 OS=Enterococcus hirae (strain ATCC 9790 / DSM 20160 / JCM 8729 / LMG 6399 / NBRC 3181 / NCIMB 6459 / NCDO 1258 / NCTC 12367 / WDCM 00089 / R) OX=768486 GN=EHR_05900 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.079453 0.919463 0.000264 0.000299 0.000250 0.000252

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003434_01297.