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CAZyme Information: MGYG000003435_02068

You are here: Home > Sequence: MGYG000003435_02068

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Spirochaetota; Spirochaetia; Sphaerochaetales; Sphaerochaetaceae; UBA5920;
CAZyme ID MGYG000003435_02068
CAZy Family PL9
CAZyme Description Pectate disaccharide-lyase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
778 84691.74 4.3234
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003435 2203968 MAG Fiji Oceania
Gene Location Start: 1290;  End: 3626  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.-.-.-

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL9 406 770 2e-109 0.976

CDD Domains      help

MGYG000003435_02068 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QSI03342.1 6.49e-275 3 778 168 952
AEJ18793.1 9.29e-234 2 769 191 974
AEE17572.1 7.42e-228 4 768 188 976
QSI01361.1 1.00e-203 9 754 181 959
QQD65452.1 3.52e-138 41 771 133 855

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1RU4_A 1.18e-30 401 706 14 317
ChainA, Pectate lyase [Dickeya chrysanthemi]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P22751 2.83e-62 34 684 26 643
Pectate disaccharide-lyase OS=Dickeya chrysanthemi OX=556 GN=pelX PE=1 SV=1
P0C1A6 7.29e-33 401 758 39 381
Pectate lyase L OS=Dickeya chrysanthemi OX=556 GN=pelL PE=3 SV=1
P0C1A7 9.61e-30 401 706 39 342
Pectate lyase L OS=Dickeya dadantii (strain 3937) OX=198628 GN=pelL PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000059 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003435_02068.