logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000003445_01198

You are here: Home > Sequence: MGYG000003445_01198

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species RC9 sp900767375
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA932; RC9; RC9 sp900767375
CAZyme ID MGYG000003445_01198
CAZy Family GH146
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
802 MGYG000003445_126|CGC1 89691.78 4.7842
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003445 1789928 MAG Fiji Oceania
Gene Location Start: 9934;  End: 12342  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003445_01198.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH146 37 541 2.7e-199 0.9980119284294234

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07944 Glyco_hydro_127 1.23e-168 37 541 1 503
Beta-L-arabinofuranosidase, GH127. One member of this family, from Bidobacterium longicum, UniProtKB:E8MGH8, has been characterized as an unusual beta-L-arabinofuranosidase enzyme, EC:3.2.1.185. It rleases l-arabinose from the l-arabinofuranose (Araf)-beta1,2-Araf disaccharide and also transglycosylates 1-alkanols with retention of the anomeric configuration. Terminal beta-l-arabinofuranosyl residues have been found in arabinogalactan proteins from a mumber of different plantt species. beta-l-Arabinofuranosyl linkages with 1-4 arabinofuranosides are also found in the sugar chains of extensin and solanaceous lectins, hydroxyproline (Hyp)2-rich glycoproteins that are widely observed in plant cell wall fractions. The critical residue for catalytic activity is Glu-338, in a ET/SCAS sequence context.
COG3533 COG3533 5.69e-105 35 569 9 530
Uncharacterized conserved protein, DUF1680 family [Function unknown].
pfam16375 DUF4986 2.04e-36 545 631 1 84
Domain of unknown function. This family around 150 residues locates in the C-terminal of some uncharacterized proteins in various Bacteroides and Bacillus species. The function of this family remains unknown.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADY37333.1 0.0 26 801 22 797
QCD36520.1 0.0 26 802 24 788
QCD43163.1 5.34e-311 28 802 23 787
QUT88913.1 3.95e-302 26 802 22 799
SCV06553.1 9.77e-302 26 802 25 799

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6YQH_AAA 7.11e-211 33 800 28 802
ChainAAA, Acetyl-CoA carboxylase, biotin carboxylase [Bacteroides thetaiotaomicron VPI-5482]
5OPJ_A 2.92e-204 33 800 28 802
Beta-L-arabinofuranosidase[Bacteroides thetaiotaomicron]
6EX6_A 2.08e-18 156 542 129 546
TheGH127, Beta-arabinofuranosidase, BT3674 [Bacteroides thetaiotaomicron VPI-5482],6EX6_B The GH127, Beta-arabinofuranosidase, BT3674 [Bacteroides thetaiotaomicron VPI-5482]
5MQO_A 1.74e-15 329 539 381 605
Glycosidehydrolase BT_1003 [Bacteroides thetaiotaomicron]
4QJY_A 2.34e-13 273 539 277 558
Crystalstructure of native Ara127N, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QJY_B Crystal structure of native Ara127N, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001073 0.917402 0.080610 0.000364 0.000278 0.000234

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003445_01198.