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CAZyme Information: MGYG000003448_00259

You are here: Home > Sequence: MGYG000003448_00259

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species RC9 sp900767405
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA932; RC9; RC9 sp900767405
CAZyme ID MGYG000003448_00259
CAZy Family GT5
CAZyme Description Glycogen synthase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
273 MGYG000003448_19|CGC1 31265.56 5.2143
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003448 1065599 MAG Fiji Oceania
Gene Location Start: 10296;  End: 11117  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003448_00259.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT5 7 239 4.2e-41 0.4682203389830508

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam08323 Glyco_transf_5 1.22e-49 8 239 1 225
Starch synthase catalytic domain.
PRK14098 PRK14098 1.09e-42 1 240 1 237
starch synthase.
cd03791 GT5_Glycogen_synthase_DULL1-like 1.07e-30 7 239 1 224
Glycogen synthase GlgA and similar proteins. This family is most closely related to the GT5 family of glycosyltransferases. Glycogen synthase (EC:2.4.1.21) catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
PRK00654 glgA 2.06e-20 7 227 2 201
glycogen synthase GlgA.
COG0297 GlgA 5.42e-15 7 239 2 224
Glycogen synthase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QKG78761.1 1.51e-111 1 273 1 268
QRO49825.1 2.01e-111 6 273 4 266
AZS31272.1 4.05e-111 6 273 4 266
QIA09804.1 9.62e-107 6 273 4 266
AGY54414.1 3.18e-106 19 273 1 254

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B4S584 4.03e-37 1 232 1 229
Glycogen synthase OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) OX=290512 GN=glgA PE=3 SV=1
Q3B6C3 1.04e-35 7 239 7 236
Glycogen synthase OS=Chlorobium luteolum (strain DSM 273 / BCRC 81028 / 2530) OX=319225 GN=glgA PE=3 SV=1
Q8KAY6 3.77e-35 1 240 1 237
Glycogen synthase OS=Chlorobaculum tepidum (strain ATCC 49652 / DSM 12025 / NBRC 103806 / TLS) OX=194439 GN=glgA PE=3 SV=1
B3QR00 5.23e-35 1 238 1 235
Glycogen synthase OS=Chlorobaculum parvum (strain DSM 263 / NCIMB 8327) OX=517417 GN=glgA PE=3 SV=1
B3EGV0 5.29e-35 1 179 1 180
Glycogen synthase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803 / 6330) OX=290315 GN=glgA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000037 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003448_00259.