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CAZyme Information: MGYG000003449_01213

You are here: Home > Sequence: MGYG000003449_01213

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-312 sp002405555
Lineage Bacteria; Verrucomicrobiota; Verrucomicrobiae; Opitutales; CAG-312; CAG-312; CAG-312 sp002405555
CAZyme ID MGYG000003449_01213
CAZy Family GH78
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
724 MGYG000003449_14|CGC2 81846.53 7.6798
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003449 2395522 MAG Fiji Oceania
Gene Location Start: 153701;  End: 155875  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003449_01213.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH78 222 711 1.1e-65 0.9841269841269841

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17389 Bac_rhamnosid6H 6.58e-10 317 646 1 332
Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
COG3459 COG3459 1.58e-06 472 570 753 857
Cellobiose phosphorylase [Carbohydrate transport and metabolism].
pfam17167 Glyco_hydro_36 2.06e-05 472 582 198 309
Glycosyl hydrolase 36 superfamily, catalytic domain. This is the catalytic region of the superfamily of enzymes referred to as GH36. UniProtKB:Q76IQ9 is a chitobiose phosphorylase that catalyzes the reversible phosphorolysis of chitobiose into alpha-GlcNAc-1-phosphate and GlcNAc with inversion of the anomeric configuration. The full-length enzyme comprises a beta sandwich domain and an (alpha/alpha)(6) barrel domain. The alpha-helical barrel component of the domain, this family, is the catalytic region.
pfam01204 Trehalase 8.51e-04 482 575 311 407
Trehalase. Trehalase (EC:3.2.1.28) is known to recycle trehalose to glucose. Trehalose is a physiological hallmark of heat-shock response in yeast and protects of proteins and membranes against a variety of stresses. This family is found in conjunction with pfam07492 in fungi.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT69832.1 4.85e-193 11 710 8 712
BCA48696.1 1.00e-192 28 710 28 713
QUT42016.1 1.75e-190 11 710 8 712
ALK82887.1 5.99e-190 8 717 7 721
ABR39463.1 5.89e-168 99 717 1 627

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3CIH_A 3.31e-51 52 690 20 672
Crystalstructure of a putative alpha-rhamnosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482]
2OKX_A 9.43e-10 289 702 503 927
Crystalstructure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1],2OKX_B Crystal structure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000497 0.998787 0.000185 0.000179 0.000164 0.000154

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003449_01213.