You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000003452_00470
You are here: Home > Sequence: MGYG000003452_00470
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Bifidobacterium ruminantium | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium ruminantium | |||||||||||
| CAZyme ID | MGYG000003452_00470 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 147569; End: 148678 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam05257 | CHAP | 3.77e-09 | 103 | 181 | 9 | 82 | CHAP domain. This domain corresponds to an amidase function. Many of these proteins are involved in cell wall metabolism of bacteria. This domain is found at the N-terminus of Escherichia coli gss, where it functions as a glutathionylspermidine amidase EC:3.5.1.78. This domain is found to be the catalytic domain of PlyCA. CHAP is the amidase domain of bifunctional Escherichia coli glutathionylspermidine synthetase/amidase, and it catalyzes the hydrolysis of Gsp (glutathionylspermidine) into glutathione and spermidine. |
| COG3942 | COG3942 | 6.96e-06 | 103 | 200 | 72 | 160 | Surface antigen [Cell wall/membrane/envelope biogenesis]. |
| cd13925 | RPF | 2.14e-05 | 296 | 342 | 5 | 53 | core lysozyme-like domain of resuscitation-promoting factor proteins. Resuscitation-promoting factor (RPF) proteins, found in various (G+C)-rich Gram-positive bacteria, act to reactivate cultures from stationary phase. This protein shares elements of the structural core of lysozyme and related proteins. Furthermore, it shares a conserved active site glutamate which is required for activity, and has a polysaccharide binding cleft that corresponds to the peptidoglycan binding cleft of lysozyme. Muralytic activity of Rpf in Micrococcus luteus correlates with resuscitation, supporting a mechanism dependent on cleavage of peptidoglycan by RPF. |
| PRK08581 | PRK08581 | 8.07e-05 | 103 | 180 | 512 | 591 | amidase domain-containing protein. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QHB63031.1 | 6.71e-252 | 1 | 369 | 1 | 379 |
| AXR41858.1 | 6.71e-252 | 1 | 369 | 1 | 379 |
| AZH71672.1 | 2.05e-246 | 1 | 369 | 1 | 379 |
| BAF40044.1 | 5.60e-225 | 11 | 369 | 67 | 424 |
| QAY33028.1 | 9.59e-123 | 9 | 369 | 2 | 342 |
Swiss-Prot Hits help
SignalP and Lipop Annotations help
This protein is predicted as LIPO
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.059841 | 0.255573 | 0.683560 | 0.000416 | 0.000345 | 0.000241 |