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CAZyme Information: MGYG000003458_01017

You are here: Home > Sequence: MGYG000003458_01017

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-127 sp900767585
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; CAG-127; CAG-127 sp900767585
CAZyme ID MGYG000003458_01017
CAZy Family GH0
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
416 MGYG000003458_68|CGC1 46339.84 4.2188
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003458 2703450 MAG Fiji Oceania
Gene Location Start: 5973;  End: 7223  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003458_01017.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam01471 PG_binding_1 2.18e-13 340 401 1 57
Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.
COG3409 PGRP 1.90e-10 330 403 116 185
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].
COG3409 PGRP 1.94e-09 335 401 39 102
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QWT53249.1 3.40e-297 1 415 5 419
ASN94441.1 4.32e-183 9 413 11 414
QRP40879.1 4.32e-183 9 413 11 414
QJU21247.1 1.23e-182 9 413 11 414
QIX92999.1 2.48e-182 9 413 11 414

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000025 0.000004 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003458_01017.