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CAZyme Information: MGYG000003463_00396

You are here: Home > Sequence: MGYG000003463_00396

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Succinivibrio sp900767695
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Succinivibrionaceae; Succinivibrio; Succinivibrio sp900767695
CAZyme ID MGYG000003463_00396
CAZy Family GT5
CAZyme Description Glycogen synthase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
485 MGYG000003463_23|CGC1 55092.1 6.4158
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003463 2187524 MAG Fiji Oceania
Gene Location Start: 11706;  End: 13163  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003463_00396.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT5 2 477 2.5e-160 0.9957627118644068

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
TIGR02095 glgA 0.0 1 479 1 473
glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. [Energy metabolism, Biosynthesis and degradation of polysaccharides]
PRK00654 glgA 0.0 1 482 1 466
glycogen synthase GlgA.
cd03791 GT5_Glycogen_synthase_DULL1-like 0.0 2 478 1 474
Glycogen synthase GlgA and similar proteins. This family is most closely related to the GT5 family of glycosyltransferases. Glycogen synthase (EC:2.4.1.21) catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
COG0297 GlgA 1.33e-162 1 485 1 484
Glycogen synthase [Carbohydrate transport and metabolism].
PRK14099 PRK14099 7.54e-100 1 478 4 478
glycogen synthase GlgA.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ACQ94224.1 2.27e-190 1 480 1 479
AXB09686.1 1.22e-188 1 480 6 483
AXB05508.1 1.22e-188 1 480 6 483
BBQ31585.1 2.45e-188 1 480 6 483
BBT54611.1 4.92e-188 1 480 6 483

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3D1J_A 2.50e-84 1 476 1 473
ChainA, Glycogen synthase [Escherichia coli]
2QZS_A 4.37e-84 1 476 1 473
CrystalStructure of Wild-type E.coli GS in complex with ADP and Glucose(wtGSb) [Escherichia coli],2R4T_A Crystal Structure of Wild-type E.coli GS in Complex with ADP and Glucose(wtGSc) [Escherichia coli],2R4U_A Crystal Structure of Wild-type E.coli GS in complex with ADP and Glucose(wtGSd) [Escherichia coli],3GUH_A Crystal Structure of Wild-type E.coli GS in complex with ADP and DGM [Escherichia coli K-12]
3COP_A 3.39e-83 1 476 1 473
ChainA, Glycogen synthase [Escherichia coli],3CX4_A Chain A, Glycogen synthase [Escherichia coli]
4HLN_A 1.23e-82 2 479 126 625
Structureof barley starch synthase I in complex with maltooligosaccharide [Hordeum vulgare]
6GNE_A 9.43e-73 1 484 10 502
Catalyticdomain of Starch Synthase IV from Arabidopsis thaliana bound to ADP and acarbose [Arabidopsis thaliana],6GNE_B Catalytic domain of Starch Synthase IV from Arabidopsis thaliana bound to ADP and acarbose [Arabidopsis thaliana]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A4SIE1 2.63e-186 1 480 6 483
Glycogen synthase OS=Aeromonas salmonicida (strain A449) OX=382245 GN=glgA PE=3 SV=1
A0KPQ1 3.73e-186 1 480 6 483
Glycogen synthase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / BCRC 13018 / CCUG 14551 / JCM 1027 / KCTC 2358 / NCIMB 9240 / NCTC 8049) OX=380703 GN=glgA PE=3 SV=1
Q6LKA1 1.03e-163 1 476 13 490
Glycogen synthase OS=Photobacterium profundum (strain SS9) OX=298386 GN=glgA PE=3 SV=1
Q87QX5 2.52e-161 1 480 6 484
Glycogen synthase OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) OX=223926 GN=glgA PE=3 SV=1
Q9KRB6 9.83e-161 2 479 5 481
Glycogen synthase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=glgA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000065 0.000002 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003463_00396.