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CAZyme Information: MGYG000003467_00112

You are here: Home > Sequence: MGYG000003467_00112

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes;
CAZyme ID MGYG000003467_00112
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1054 117196.56 4.7633
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003467 1904394 MAG Fiji Oceania
Gene Location Start: 3150;  End: 6314  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003467_00112.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 336 1051 2.5e-218 0.8871359223300971

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 0.0 29 855 1 869
alpha-L-rhamnosidase.
PRK10150 PRK10150 9.57e-05 934 1007 57 133
beta-D-glucuronidase; Provisional
cd03143 A4_beta-galactosidase_middle_domain 2.08e-04 673 779 39 129
A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to beta-galactosidase from Thermus thermophilus. Beta-Galactosidase hydrolyzes the beta-1,4-D-galactosidic linkage of lactose, as well as those of related chromogens, o-nitrophenyl-beta-D-galactopyranoside (ONP-Gal) and 5-bromo-4-chloro-3-indolyl-beta-D-galactoside (X-gal). This A4 beta-galactosidase middle domain lacks the catalytic triad of typical GATase1 domains. The reactive Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in typical GATase1 domains is not conserved in this group.
pfam04199 Cyclase 2.29e-04 338 387 70 138
Putative cyclase. Proteins in this family are thought to be cyclase enzymes. They are found in proteins involved in antibiotic synthesis. However they are also found in organisms that do not make antibiotics pointing to a wider role for these proteins. The proteins contain a conserved motif HXGTHXDXPXH that is likely to form part of the active site.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
SCD21026.1 0.0 21 1052 30 1077
SCM59077.1 0.0 21 1052 32 1078
QUT50381.1 0.0 24 1052 28 1072
QGA23785.1 0.0 4 1052 6 1079
QGY42775.1 0.0 20 1051 29 1073

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6Q2F_A 1.21e-133 24 1051 42 1138
Structureof Rhamnosidase from Novosphingobium sp. PP1Y [Novosphingobium sp. PP1Y]
5MQM_A 3.13e-100 11 1052 9 1099
Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron],5MQN_A Glycoside hydrolase BT_0986 [Bacteroides thetaiotaomicron]
5MWK_A 8.14e-100 11 1052 9 1099
Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
T2KNA8 1.10e-109 6 1051 11 1155
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22040 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000001 1.000072 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003467_00112.