logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000003482_00672

You are here: Home > Sequence: MGYG000003482_00672

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Selenomonas_C bovis
Lineage Bacteria; Firmicutes_C; Negativicutes; Selenomonadales; Selenomonadaceae; Selenomonas_C; Selenomonas_C bovis
CAZyme ID MGYG000003482_00672
CAZy Family GH170
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
358 MGYG000003482_13|CGC1 39607.23 6.5965
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003482 2265437 MAG Fiji Oceania
Gene Location Start: 17042;  End: 18118  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003482_00672.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH170 3 354 1.2e-114 0.9914285714285714

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam19200 DUF871_N 9.31e-96 4 237 2 234
DUF871 N-terminal domain. This family consists of several conserved hypothetical proteins from bacteria and archaea. The function of this family is unknown.
COG3589 COG3589 1.03e-87 1 354 2 356
Uncharacterized protein [Function unknown].
pfam05913 DUF871 1.40e-41 244 354 1 115
Bacterial protein of unknown function (DUF871). This family consists of several conserved hypothetical proteins from bacteria and archaea. The function of this family is unknown.
COG4070 COG4070 1.82e-05 266 353 228 310
Uncharacterized protein, methanogenesis marker protein 3, UPF0288 family [Function unknown].
PRK00969 PRK00969 3.95e-05 283 353 244 311
methanogenesis marker 3 protein.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BAL83299.1 5.84e-149 1 355 1 354
AEC00050.1 7.58e-146 1 354 1 356
BAL84230.1 2.42e-111 1 358 1 357
ASW42367.1 2.76e-111 1 354 1 354
QIB59543.1 1.05e-109 1 352 1 351

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2P0O_A 1.55e-54 4 353 6 356
Crystalstructure of a conserved protein from locus EF_2437 in Enterococcus faecalis with an unknown function [Enterococcus faecalis V583]
1X7F_A 1.34e-51 4 353 30 382
Crystalstructure of an uncharacterized B. cereus protein [Bacillus cereus ATCC 14579]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A0A0H2XHV5 6.95e-35 4 354 3 343
6-phospho-N-acetylmuramidase OS=Staphylococcus aureus (strain USA300) OX=367830 GN=mupG PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000088 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003482_00672.