CAZyme Information: MGYG000003482_01343

Basic Information

• Species: Selenomonas_C bovis
• Lineage: Bacteria; Firmicutes_C; Negativicutes; Selenomonadales; Selenomonadaceae; Selenomonas_C; Selenomonas_C bovis
• CAZyme ID: MGYG000003482_01343
• CAZy Family: CBM48
• CAZyme Description: 1,4-alpha-glucan branching enzyme GlgB

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
800		91361.66	7.2653

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003482	2265437	MAG	Fiji	Oceania

• Gene Location: Start: 92357; End: 94759 Strand: +

Full Sequence      

MKTSDLSEFDLYLFHQGTNYHAYEMLGSHFLTQDGKDGVRFAVWAPHAKSVSVVGDFNDW
DTRRHPMQRIGDGEIWEAFIEGLKEGDIYKYAIEPQWGGPHIMKADPYGFYAEKTPNTAS
RLYDLNHYAWQDGAWQEEKKTESSYERPMLTYEVHAGSWRRTLDGEYLSYRDLADQLVDY
VKQMHYTHIEFMPLCEHPFDGSWGYQATGYYAVTSRYGTPDDFRYLVDKAHAAGIGVIMD
WVPGHFCKDEQGLRHFDGLTLYESDNEQRAENWEWGTTNFDYGRTEVQSFLISNALFWFE
EFHIDGLRIDAVANMLYLNYGRKDGEWTPNKYGETGNLEAMDFIKKLNETVFKYHPQALM
IAEESTAWPLISRPVYMGGMGFNYKWNMGWMNDMLKYMSLDPIYRKWNHDKVTFSFMYAF
SENFVLPLSHDEVVHGKCSLIGKMPGDYWQKFANLRAFFGYWMAHPGKKLLFMGGEFGQF
IEWKYDDSLDWHLVQKYPMHTKMLEYSRALNKFYCENKALWQVDFDWNGFQWIDPDDNEN
SVISFIRKAEDGDDFLIAVCNFTPEVRHGYRIGVPKKGVYYEVFNSDDEAYGGSGVKNGD
LASEDVPWHNRSQSIALTVPPLATVYLRLRGTAAAGRGDAPAPEEAEAKGESKEASEAKT
VAATAKPKRRTAAKTTKSAKATRTVKTAKSAKTTAKTAKKRAVTKSAKPVAEEKTAGAAV
AKKAAAKDTEKKTRTRTTHKKAADAGETAAKKPLVKRTRVASKKTADKAEKSEQTEATET
ARKRTTRTTRRNTAAQAANE

Enzyme Prediction     

EC	2.4.1.18

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH13	179	479	6.7e-157	0.9966777408637874
CBM48	26	113	1e-22	0.868421052631579

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
PRK12313	PRK12313	0.0	1	633	2	631	1,4-alpha-glucan branching protein GlgB.
COG0296	GlgB	0.0	6	629	6	628	1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism].
PRK14705	PRK14705	0.0	6	627	603	1220	glycogen branching enzyme; Provisional
PRK14706	PRK14706	0.0	25	633	26	625	glycogen branching enzyme; Provisional
PRK05402	PRK05402	0.0	6	632	100	726	1,4-alpha-glucan branching protein GlgB.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AME04248.1	0.0	1	636	1	637
AKT53144.1	0.0	1	636	1	637
BAL82148.1	0.0	1	630	1	631
AEC00976.1	0.0	1	632	1	633
ANR69628.1	0.0	1	648	1	649

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5GQW_A	1.29e-241	6	632	129	776	Crystalstructure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GQX_A Crystal structure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]
5GR5_A	3.66e-241	6	632	129	776	Crystalstructure of branching enzyme W610A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]
5GR0_A	3.66e-241	6	632	129	776	Crystalstructure of branching enzyme D501A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]
5GQU_A	7.33e-241	6	632	129	776	Crystalstructure of branching enzyme from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GQV_A Crystal structure of branching enzyme from Cyanothece sp. ATCC 51142 in complex with maltohexaose [Crocosphaera subtropica ATCC 51142],5GQY_A Crystal structure of branching enzyme from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]
5GR2_A	2.08e-240	6	632	129	776	Crystalstructure of branching enzyme L541A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GR4_A Crystal structure of branching enzyme L541A mutant from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
B8CVY1	9.83e-301	1	628	1	626	1,4-alpha-glucan branching enzyme GlgB OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) OX=373903 GN=glgB PE=3 SV=1
Q1AZ86	9.55e-270	6	630	99	720	1,4-alpha-glucan branching enzyme GlgB OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129 / PRD-1) OX=266117 GN=glgB PE=3 SV=1
O66936	5.49e-258	2	631	3	630	1,4-alpha-glucan branching enzyme GlgB OS=Aquifex aeolicus (strain VF5) OX=224324 GN=glgB PE=3 SV=1
Q8DLB8	5.54e-257	2	629	102	750	1,4-alpha-glucan branching enzyme GlgB OS=Thermosynechococcus vestitus (strain IAM M-273 / NIES-2133 / BP-1) OX=197221 GN=glgB PE=3 SV=1
Q8XPA2	1.71e-255	1	629	27	657	1,4-alpha-glucan branching enzyme GlgB 1 OS=Clostridium perfringens (strain 13 / Type A) OX=195102 GN=glgB1 PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000020	0.000001	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000003482_01343.