logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000003483_00609

You are here: Home > Sequence: MGYG000003483_00609

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species RUG572 sp900547945
Lineage Bacteria; Verrucomicrobiota; Kiritimatiellae; RFP12; UBA1067; RUG572; RUG572 sp900547945
CAZyme ID MGYG000003483_00609
CAZy Family GH39
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1011 109694.34 8.0987
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003483 3685575 MAG Fiji Oceania
Gene Location Start: 9780;  End: 12815  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003483_00609.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH39 72 254 1.8e-26 0.5081206496519721

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam01229 Glyco_hydro_39 6.27e-04 112 246 126 283
Glycosyl hydrolases family 39.
pfam02449 Glyco_hydro_42 0.007 48 90 18 61
Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QDU57372.1 6.43e-155 28 626 28 628
AVM44885.1 6.71e-112 20 629 19 618
AVM44901.1 2.34e-57 12 531 13 542
AHF90941.1 2.05e-41 27 607 231 824
QAT16636.1 2.26e-38 48 243 125 327

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4EKJ_A 2.80e-08 73 204 81 231
ChainA, Beta-xylosidase [Caulobacter vibrioides]
4M29_A 2.80e-08 73 204 81 231
Structureof a GH39 Beta-xylosidase from Caulobacter crescentus [Caulobacter vibrioides CB15]
6UQJ_A 4.06e-06 38 239 45 285
Crystalstructure of the GH39 enzyme from Xanthomonas axonopodis pv. citri [Xanthomonas citri pv. citri str. 306]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000306 0.998930 0.000188 0.000201 0.000169 0.000160

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003483_00609.