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CAZyme Information: MGYG000003483_02338

You are here: Home > Sequence: MGYG000003483_02338

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species RUG572 sp900547945
Lineage Bacteria; Verrucomicrobiota; Kiritimatiellae; RFP12; UBA1067; RUG572; RUG572 sp900547945
CAZyme ID MGYG000003483_02338
CAZy Family GH50
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
919 MGYG000003483_120|CGC1 100448.71 7.9884
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003483 3685575 MAG Fiji Oceania
Gene Location Start: 24418;  End: 27177  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003483_02338.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH50 294 644 8.5e-52 0.5467075038284839

CDD Domains      help

MGYG000003483_02338 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QNN20901.1 6.92e-123 28 874 46 896
AHF11385.1 9.49e-96 35 649 55 697
AHF11388.1 1.16e-86 241 649 94 533
ASJ00655.1 7.43e-57 223 652 66 495
ADG91381.1 1.36e-56 240 642 86 487

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5Z6P_A 3.45e-16 303 631 415 744
Thecrystal structure of an agarase, AgWH50C [Agarivorans gilvus],5Z6P_B The crystal structure of an agarase, AgWH50C [Agarivorans gilvus]
4BQ2_A 3.06e-15 305 634 399 731
Structuralanalysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_C Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_D Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_A Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_C Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_D Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40]
4BQ4_A 6.97e-15 305 634 399 731
Structuralanalysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ4_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ5_A Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ5_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40]
6XJ9_A 7.08e-15 305 634 417 747
Structureof PfGH50B [Pseudoalteromonas fuliginea],6XJ9_B Structure of PfGH50B [Pseudoalteromonas fuliginea]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P48840 3.98e-13 246 649 488 952
Beta-agarase B OS=Vibrio sp. (strain JT0107) OX=47913 GN=agaB PE=3 SV=1
P48839 7.00e-13 241 635 453 902
Beta-agarase A OS=Vibrio sp. (strain JT0107) OX=47913 GN=agaA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000828 0.998118 0.000356 0.000231 0.000208 0.000208

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003483_02338.