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CAZyme Information: MGYG000003489_00373
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Prevotellamassilia sp900768625 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotellamassilia; Prevotellamassilia sp900768625 | |||||||||||
| CAZyme ID | MGYG000003489_00373 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 8828; End: 10165 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 198 | 435 | 2.8e-39 | 0.6984615384615385 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 8.87e-11 | 209 | 382 | 230 | 393 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| PLN03003 | PLN03003 | 1.59e-07 | 268 | 399 | 188 | 308 | Probable polygalacturonase At3g15720 |
| pfam00295 | Glyco_hydro_28 | 9.91e-06 | 200 | 438 | 88 | 295 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| PLN03010 | PLN03010 | 4.38e-05 | 180 | 377 | 115 | 305 | polygalacturonase |
| PLN02218 | PLN02218 | 3.17e-04 | 268 | 388 | 242 | 351 | polygalacturonase ADPG |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QUU00181.1 | 1.39e-141 | 4 | 437 | 11 | 431 |
| QUT34117.1 | 3.18e-140 | 4 | 437 | 11 | 431 |
| QQR19335.1 | 3.13e-139 | 5 | 437 | 13 | 437 |
| ANU59785.1 | 3.13e-139 | 5 | 437 | 13 | 437 |
| QUR43693.1 | 6.28e-139 | 26 | 437 | 40 | 437 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q9LW07 | 4.03e-08 | 268 | 414 | 188 | 327 | Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1 |
| A7PZL3 | 1.75e-07 | 223 | 380 | 202 | 359 | Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 |
| P49062 | 2.59e-06 | 219 | 417 | 168 | 355 | Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana OX=3702 GN=PGA3 PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.365560 | 0.633219 | 0.000377 | 0.000407 | 0.000214 | 0.000216 |