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CAZyme Information: MGYG000003493_02432

You are here: Home > Sequence: MGYG000003493_02432

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp002299275
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp002299275
CAZyme ID MGYG000003493_02432
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
686 73379.27 4.9981
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003493 3028354 MAG Fiji Oceania
Gene Location Start: 1239;  End: 3299  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003493_02432.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 80 269 2.9e-76 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 1.58e-05 9 227 10 236
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 0.006 74 227 3 151
Amb_all domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QCD39200.1 2.92e-216 22 624 19 711
QCP72891.1 2.92e-216 22 624 19 711
QQR08040.1 1.48e-195 2 664 3 668
QUT77823.1 1.96e-188 29 495 53 523
QUT75603.1 6.97e-182 14 657 4 625

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8NQQ7 2.35e-46 29 487 22 414
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q2UB83 1.07e-44 29 487 22 414
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
Q0CLG7 1.24e-42 11 487 10 414
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1
Q5B297 2.69e-40 14 489 13 413
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1
B0XMA2 3.61e-40 11 487 3 415
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000293 0.998957 0.000194 0.000195 0.000183 0.000155

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003493_02432.